Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H14
(450 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 31 0.27
At3g51060.1 68416.m05591 zinc finger protein, putative / lateral... 31 0.48
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 29 1.5
At1g32190.1 68414.m03959 expressed protein 29 1.5
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 29 1.5
At5g12330.3 68418.m01451 lateral root primordium 1 (LRP1) identi... 29 1.9
At5g12330.2 68418.m01450 lateral root primordium 1 (LRP1) identi... 29 1.9
At5g12330.1 68418.m01449 lateral root primordium 1 (LRP1) identi... 29 1.9
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 28 2.5
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 28 2.5
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 28 3.4
At2g44400.1 68415.m05522 DC1 domain-containing protein similar ... 27 7.7
At1g73010.1 68414.m08443 expressed protein similar to phosphatas... 27 7.7
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 27 7.7
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 149 VGAVSFFDLVKEEWNTFKMEHSKVYDNEMEDKFRMKIYAENKHNIAKHN 295
V + S D + E ++ + +H K Y +E E + R++I+ +N + +HN
Sbjct: 19 VSSSSSSDDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHN 67
>At3g51060.1 68416.m05591 zinc finger protein, putative / lateral
root primordium (LRP) protein-related similar to lateral
root primordium 1 (LRP1) [Arabidopsis thaliana]
GI:882341; contains Pfam profile PF05142: Domain of
unknown function (DUF702)
Length = 252
Score = 30.7 bits (66), Expect = 0.48
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 314 GIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
G GGG+G S C C + C RCRT C + +CST
Sbjct: 134 GSGGGSGGVS-CQDCGNQAKK--DCSHMRCRTCCKSRGFECST 173
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 188 WNTFKMEHSKVYDNEMEDKFRMKIYAENKHNIAKHNQRRL 307
+ ++ ++H KVYD+ E + R+ I+ +N I N L
Sbjct: 56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENL 95
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 305 GGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
G GC C + SC C C + CC P+ KCS+
Sbjct: 324 GDCGCFKCSCPTLKGCFSC--CKKPSCVSSCCCPTFKCSS 361
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 158 VSFFD-LVKEEWNTFKMEHSKVYDNEMEDKFRMKIYAENKHNIAKHNQR 301
V+F + +V E + S+VY +E+E + R ++ +N I K N++
Sbjct: 36 VTFHEPIVAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKK 84
>At5g12330.3 68418.m01451 lateral root primordium 1 (LRP1) identical
to lateral root primordium 1 (LRP1) [Arabidopsis
thaliana] GI:882341; contains Pfam profile PF05142:
Domain of unknown function (DUF702)
Length = 226
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 320 DEGIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
+ G G GA + C C + C RCRT C + CST
Sbjct: 99 NSGSGSGASGTATCQDCGNQAKK--ECKQRRCRTCCKSRGFDCST 141
>At5g12330.2 68418.m01450 lateral root primordium 1 (LRP1) identical
to lateral root primordium 1 (LRP1) [Arabidopsis
thaliana] GI:882341; contains Pfam profile PF05142:
Domain of unknown function (DUF702)
Length = 320
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 320 DEGIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
+ G G GA + C C + C RCRT C + CST
Sbjct: 99 NSGSGSGASGTATCQDCGNQAKK--ECKQRRCRTCCKSRGFDCST 141
>At5g12330.1 68418.m01449 lateral root primordium 1 (LRP1) identical
to lateral root primordium 1 (LRP1) [Arabidopsis
thaliana] GI:882341; contains Pfam profile PF05142:
Domain of unknown function (DUF702)
Length = 320
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 320 DEGIGGGAGCASQCCVCSQRISSCGTCPPFRCRTLCCAPS*KCST 186
+ G G GA + C C + C RCRT C + CST
Sbjct: 99 NSGSGSGASGTATCQDCGNQAKK--ECKQRRCRTCCKSRGFDCST 141
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 170 DLVKEEWNTFKMEHSKVYDNEMEDKFRMKIYAENKHNIAKHN 295
D + E + ++ EHSK Y + E R +++ EN +I + N
Sbjct: 45 DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRN 86
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 170 DLVKEEWNTFKMEHSKVYDNEMEDKFRMKIYAENKHNIAKHN 295
D + E + ++ EHSK Y + E R +++ EN +I + N
Sbjct: 45 DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRN 86
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 203 MEHSKVYDNEMEDKFRMKIYAENKHNIAKHN 295
++ S+VYD+E E + R+++ EN I N
Sbjct: 44 IQFSRVYDDEFEKQLRLQVLTENLKFIESFN 74
>At2g44400.1 68415.m05522 DC1 domain-containing protein similar to
GP|2435515|AF024504
Length = 146
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = -2
Query: 314 GIGGGAGCASQCCVC-----SQRISSCGTCPPF 231
G G A + QCCVC + + SCG C F
Sbjct: 110 GPGSAAASSFQCCVCRGLGSNSWLYSCGECSGF 142
>At1g73010.1 68414.m08443 expressed protein similar to phosphatase,
orphan 1 (GI:20196841) [Mus musculus], (GI:20196839)
[Homo sapiens]; contains TIGRFAM TIGR01489:
2,3-diketo-5-methylthio-1-phosphopentane phosphatase
profile; contains TIGRFAM TIGR01488: HAD-superfamily
hydrolase, subfamily IB (PSPase-like)
Length = 295
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 254 SCGTCPPFRCRTL 216
SCGTCPP C+ L
Sbjct: 156 SCGTCPPNMCKGL 168
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 182 EEWNTFKMEHSKVYDNEMEDKFRMKIYAENKHNIAKHN 295
++W T + S+VY +E E + R+K++ +N I N
Sbjct: 39 QQWMT---QFSRVYKDESEKEMRLKVFKKNLKFIENFN 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,027,017
Number of Sequences: 28952
Number of extensions: 111160
Number of successful extensions: 408
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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