Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H10
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.30 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   2.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   4.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 20/75 (26%), Positives = 28/75 (37%)
 Frame = +2

Query: 74  NVGVGSAGSGIYSGKAGSLISIMPGVPTTRLLVSRVPKVPGQVSGESYPGPIYDNPSDHD 253
           N+G     + +Y+ K  +  S   G PT  +     P  P    G S  G  YD  S +D
Sbjct: 291 NIGKAQEEANLYAAKKAAGASPYSGTPTPMM----SPAPPQDSMGYSM-GSAYDQSSAYD 345

Query: 254 GLRLITDPSLVSHIS 298
                 DP     +S
Sbjct: 346 ASSCGYDPMHAQELS 360


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
          growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 41 FCTHMLLGFA 12
          FCTH++ G+A
Sbjct: 49 FCTHLIYGYA 58


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 56 ESSRSFCTHMLLGFA 12
          E +  +CTH++ G+A
Sbjct: 49 EPALQYCTHLIYGYA 63


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 363 KSDSTKPEATPFLIIE 410
           K++  KPE  PFL ++
Sbjct: 345 KAEEAKPETLPFLNLQ 360


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 114 PEYIPEPADPTPTLLAPEARK 52
           PEY P+P    P   + E +K
Sbjct: 400 PEYYPDPEKYDPERFSDENKK 420


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 51 FTFILYAYASWICTAV 4
          F+F +  +++WIC  V
Sbjct: 39 FSFAVTFFSAWICALV 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,527
Number of Sequences: 336
Number of extensions: 2525
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)