Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H10
         (417 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    27   0.064
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.45 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   1.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   1.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   2.4  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   2.4  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   2.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   3.2  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   5.6  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   5.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.7  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 0.064
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 56  LASGANNVGVGSAGSGIYSGKAGSLISIMPGVPTTRLLVSRVPKVPGQV 202
           L +GAN+ G+G        GK   +I I P V   + LV  +   PG++
Sbjct: 11  LVTGANS-GIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKL 58


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 56   LASGANNVGVGSAGSG 103
            LASG  NVGVG + SG
Sbjct: 1207 LASGNKNVGVGVSNSG 1222


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL-LAPEA 58
           P YIP+P  P P L   PEA
Sbjct: 103 PVYIPQPRPPHPRLRREPEA 122



 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL-LAPEA 58
           P YIP+P  P P L   PEA
Sbjct: 129 PVYIPQPRPPHPRLRREPEA 148



 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 47  PIYIPQPRPPHPRL 60



 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 75  PIYIPQPRPPHPRL 88



 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P +
Sbjct: 155 PVYIPQPRPPHPRI 168


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL---LAPEAR 55
           P YIP+P  P P L     PEA+
Sbjct: 242 PVYIPQPRPPHPRLRREAKPEAK 264



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 46  PVYIPQPRPPHPRL 59



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 74  PVYIPQPRPPHPRL 87



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 130 PVYIPQPRPPHPRL 143



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 186 PVYIPQPRPPHPRL 199



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 214 PVYIPQPRPPHPRL 227



 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P +
Sbjct: 270 PVYIPQPRPPHPRI 283


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 137 IMPGVPTTRLLVSRVPKVPGQVSGESYPGPIYDNPSDHDGL 259
           I  GVP T   V+R   + G      YP   Y++    DGL
Sbjct: 80  IQDGVPLTLGYVTREVSIDGNPLIAPYPNWSYNDVKYCDGL 120


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 47  PVYIPQPRPPHPRL 60



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 75  PVYIPQPRPPHPRL 88



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 103 PVYIPQPRPPHPRL 116



 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P +
Sbjct: 131 PVYIPQPRPPHPRI 144


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 59  ASGANNVGVGSAGSGIYSGKAGSLISIMP 145
           +SG + V   S+ +GI++G  GS+I+I P
Sbjct: 70  SSGDSPVSSHSS-NGIHTGFGGSIITIPP 97


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 18  PVYIPQPRPPHPRL 31



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 46  PVYIPQPRPPHPRL 59



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 74  PVYIPQPRPPHPRL 87



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 102 PVYIPQPRPPHPRL 115



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 130 PVYIPQPRPPHPRL 143



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P L
Sbjct: 158 PVYIPQPRPPHPRL 171



 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 114 PEYIPEPADPTPTL 73
           P YIP+P  P P +
Sbjct: 186 PVYIPQPRPPHPRI 199


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 412 SSIIRK-GVASGLVESDFKMAADIFI 338
           S+I+R   V S + ES+F++ ADI +
Sbjct: 503 STILRNFRVRSDVKESEFRLQADIIL 528


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 242 SDHDGLRLITDPSL 283
           S HDGL L T PS+
Sbjct: 169 SMHDGLVLYTTPSI 182


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 242 SDHDGLRLITDPSL 283
           S HDGL L T PS+
Sbjct: 164 SMHDGLVLYTTPSI 177


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 345 MSAAILKSDSTKPEAT 392
           +S+ +  SDSTKPE +
Sbjct: 542 LSSGLSISDSTKPETS 557


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 354 AILKSDSTKPEATP 395
           AILK  S KP +TP
Sbjct: 880 AILKIPSYKPASTP 893


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,766
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 32
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)