Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H10
(417 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g52100.1 68414.m05879 jacalin lectin family protein similar t... 30 0.54
At5g57870.2 68418.m07239 eukaryotic translation initiation facto... 29 1.7
At5g57870.1 68418.m07238 eukaryotic translation initiation facto... 29 1.7
At1g79400.1 68414.m09253 cation/proton exchanger, putative (CHX2... 28 2.2
At3g21175.1 68416.m02675 zinc finger (GATA type) family protein ... 27 3.8
At5g45780.1 68418.m05630 leucine-rich repeat transmembrane prote... 27 5.1
At4g23600.2 68417.m03400 coronatine-responsive tyrosine aminotra... 27 5.1
At4g23600.1 68417.m03399 coronatine-responsive tyrosine aminotra... 27 5.1
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 27 5.1
At3g17670.1 68416.m02256 ferredoxin-related contains Pfam PF0051... 27 5.1
At1g62340.1 68414.m07034 subtilisin-like serine protease / abnor... 27 5.1
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 27 5.1
At5g09560.1 68418.m01107 KH domain-containing protein various pr... 27 6.7
At1g79270.1 68414.m09241 expressed protein contains Pfam profile... 27 6.7
At1g66200.1 68414.m07514 glutamine synthetase, putative similar ... 27 6.7
At5g22560.1 68418.m02635 hypothetical protein contains Pfam prof... 26 8.9
At5g19840.1 68418.m02357 transcription factor jumonji (jmjC) dom... 26 8.9
At1g76110.1 68414.m08838 high mobility group (HMG1/2) family pro... 26 8.9
At1g73670.1 68414.m08531 mitogen-activated protein kinase, putat... 26 8.9
At1g72900.1 68414.m08432 disease resistance protein (TIR-NBS cla... 26 8.9
>At1g52100.1 68414.m05879 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain; contains non-consensus AG
donor splice site at exon3
Length = 381
Score = 30.3 bits (65), Expect = 0.54
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 176 RVPKVPGQVSGESYPGPIYDNPSDHDGLRLI---TDPSLVSHI 295
++P + + G G +D+ D+DG+R + TD S + H+
Sbjct: 143 KIPSIQSAIEGAKTTGKGFDDGGDYDGIRKVYVTTDGSAIRHV 185
>At5g57870.2 68418.m07239 eukaryotic translation initiation factor
4F, putative / eIF-4F, putative similar to SP|Q03387
Eukaryotic initiation factor (iso)4F subunit P82-34
(eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
profiles PF02854: MIF4G domain, PF02847: MA3 domain
Length = 776
Score = 28.7 bits (61), Expect = 1.7
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 104 IYSGKAGSLISIMPGVPTTRLLVSRVPKVPGQVSGESYPGPIYDNPSDHDGLRLITDPSL 283
+Y G +MPG+P TR R+P +PG V +++ P + S DG + P++
Sbjct: 487 VYPGGRPGAGGLMPGMPGTR----RMPGMPG-VDNDNWEVPRTRSMSRRDGPGPLHSPAV 541
Query: 284 ---VSHISRPLVQGS 319
S +R L QGS
Sbjct: 542 SKSASMNTRLLPQGS 556
>At5g57870.1 68418.m07238 eukaryotic translation initiation factor
4F, putative / eIF-4F, putative similar to SP|Q03387
Eukaryotic initiation factor (iso)4F subunit P82-34
(eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
profiles PF02854: MIF4G domain, PF02847: MA3 domain
Length = 780
Score = 28.7 bits (61), Expect = 1.7
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 104 IYSGKAGSLISIMPGVPTTRLLVSRVPKVPGQVSGESYPGPIYDNPSDHDGLRLITDPSL 283
+Y G +MPG+P TR R+P +PG V +++ P + S DG + P++
Sbjct: 491 VYPGGRPGAGGLMPGMPGTR----RMPGMPG-VDNDNWEVPRTRSMSRRDGPGPLHSPAV 545
Query: 284 ---VSHISRPLVQGS 319
S +R L QGS
Sbjct: 546 SKSASMNTRLLPQGS 560
>At1g79400.1 68414.m09253 cation/proton exchanger, putative (CHX2)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 783
Score = 28.3 bits (60), Expect = 2.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 113 GKAGSLISIMPGVPTTRLLVSRVPKV 190
G+AG + I+ G+ + +L+SR+PKV
Sbjct: 44 GQAGPVAQILAGIVLSPVLLSRIPKV 69
>At3g21175.1 68416.m02675 zinc finger (GATA type) family protein
similar to zinc finger protein ZIM gi:8918533 from
[Arabidopsis thaliana]; contains Pfam PF00320: GATA zinc
finger
Length = 297
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 219 GYDSPDTCPGTLGTLETSNRVVGTPG 142
G + P T P TLG+ +NRV+G G
Sbjct: 108 GREVPHTLPTTLGSPHQNNRVLGLSG 133
>At5g45780.1 68418.m05630 leucine-rich repeat transmembrane protein
kinase, putative
Length = 614
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -1
Query: 333 NVNSWDPCTKGLLMCDTKDGSVINLRPS*SDGLS 232
++NS DPCT ++ C + +G V++L + S GLS
Sbjct: 61 DINSVDPCTWNMVGC-SSEGFVVSLEMA-SKGLS 92
>At4g23600.2 68417.m03400 coronatine-responsive tyrosine
aminotransferase / tyrosine transaminase similar to
nicotianamine aminotransferase from Hordeum vulgare
[GI:6498122, GI:6469087]; contains Pfam profile PF00155
aminotransferase, classes I and II; identical to cDNA
coronatine-regulated tyrosine aminotransferase
(F9D16.70) GI:15076852
Length = 318
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 119 LYRNIFPNLQIRHQRYWPQK 60
L R+I+ NL++RH + P+K
Sbjct: 34 LVRSIYKNLEVRHYNFLPEK 53
>At4g23600.1 68417.m03399 coronatine-responsive tyrosine
aminotransferase / tyrosine transaminase similar to
nicotianamine aminotransferase from Hordeum vulgare
[GI:6498122, GI:6469087]; contains Pfam profile PF00155
aminotransferase, classes I and II; identical to cDNA
coronatine-regulated tyrosine aminotransferase
(F9D16.70) GI:15076852
Length = 422
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 119 LYRNIFPNLQIRHQRYWPQK 60
L R+I+ NL++RH + P+K
Sbjct: 138 LVRSIYKNLEVRHYNFLPEK 157
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 27.1 bits (57), Expect = 5.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 124 TCFTGIYSRTCRSDTNVIGP 65
+CFT ++ +TC +D N+ P
Sbjct: 42 SCFTPLFHKTCANDKNIAHP 61
>At3g17670.1 68416.m02256 ferredoxin-related contains Pfam PF00515:
TPR Domain; similar to ferredoxin PetF2 (GI:22651984)
[Synechococcus sp. PCC 7002]
Length = 366
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 4 DCCANPRSICVQNERELSGFWGQ*RWCRIC 93
+CC R+ CV E G W +WC+ C
Sbjct: 73 NCCGKGRTNCVDVEMLPRGEWP--KWCKSC 100
>At1g62340.1 68414.m07034 subtilisin-like serine protease / abnormal
leaf shape1 (ALE1) identical to subtilisin-like serine
protease [Arabidopsis thaliana] GI:16444944
Length = 832
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 189 TLGTLETSNRVVGTPGMMLIKEPALPEYIPEPA-DPTPTLLAPEARKFTFILYAY 28
T+ + + R +G G +LI P +Y+ EP P +L P IL Y
Sbjct: 470 TVLAITQTARTLGFMGFILIANPRFGDYVAEPVIFSAPGILIPTVSAAQIILRYY 524
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +2
Query: 95 GSGIYSGKAGSLISIMPGVPTTRLLVSR---VPKVPGQVSGESYPGPIYDNP 241
GS + S AG +S+ P L S P+VP S E P PI P
Sbjct: 49 GSALSSFAAGEPLSVSENTPAVFLRPSSSQDAPRVPSSHSPEPPPPPIRSKP 100
>At5g09560.1 68418.m01107 KH domain-containing protein various
predicted RNA binding proteins, Arabidopsis thaliana
Length = 563
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 293 ISRPLVQGSQEFTLVDKDVSCHFKIRLNQAGGDTFPYYRAI 415
+ RP+ SQ++ VD S H + ++Q P++R I
Sbjct: 229 LRRPMEYRSQQYREVDPHGSLHRHVEISQEDALVRPFFRTI 269
>At1g79270.1 68414.m09241 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 528
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 104 IYSGKAGSLISIMPGVPTTRLLVSRVPKVPGQVSGESYPGPIY 232
+ G+ GS+I +MPG + + +P P VS ++ P+Y
Sbjct: 99 VMQGENGSVIYLMPGFQSYDASQTYMPINPVGVSSQALHSPMY 141
>At1g66200.1 68414.m07514 glutamine synthetase, putative similar to
glutamine synthetase, cytosolic isozyme (Glutamate--
ammonia ligase, GS1) [Lotus japonicus] SWISS-PROT:Q42899
Length = 356
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 248 HDGLRLITDPSLVSHISRPLVQGSQEFTLVDKDVSCHFKIRLNQAGGDTFPYYRAI 415
H + +P +++ + P QE+TL+ KDV+ + G PYY +I
Sbjct: 108 HAAAEIFANPDVIAEV--PWYGIEQEYTLLQKDVNWPLGWPIGGFPGPQGPYYCSI 161
>At5g22560.1 68418.m02635 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 517
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 162 RVVGTPGMMLIKEPALPEYIPEPADPTPTLLAPEARKF 49
R TP + K P LP P P P L P R+F
Sbjct: 294 RETSTPPPIETKTPPLPPPPPTLTQPHPKPLTPPPRRF 331
>At5g19840.1 68418.m02357 transcription factor jumonji (jmjC)
domain-containing protein low similarity to PASS1 [Homo
sapiens] GI:21591407; contains Pfam profile PF02373:
jmjC domain
Length = 505
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 191 PGQVSGESYPGPIYDNPSDHDGLRLITDPSLVSH-ISRPLVQGSQEFTL 334
P S YP PIY S+H + L +P+L + + ++ SQE TL
Sbjct: 205 PPSASPSLYPMPIYGEASNHSSVGL-ENPNLSDYPRAEHSLKQSQEITL 252
>At1g76110.1 68414.m08838 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to high mobility group protein
[Plasmodium falciparum] GI:790198; contains Pfam
profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 338
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 236 NPSDHDGLRLI--TDPSLVSHISRPLVQGSQEFTLV 337
NPS + L+ T PS+ H + P QGS FT +
Sbjct: 146 NPSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAI 181
>At1g73670.1 68414.m08531 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK15) similar to mitogen-activated
protein kinase GB:A56042 [Dictyostelium discoideum];
mitogen-activated protein kinase (MAPK)(AtMPK15),
PMID:12119167; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 431
Score = 26.2 bits (55), Expect = 8.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 224 PIYDNPSDHDGLRLITDPSLVSHI 295
P NP+D + L+ +TDPS + I
Sbjct: 37 PTVSNPNDDEDLKKLTDPSKLRQI 60
>At1g72900.1 68414.m08432 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 363
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 138 SCQEFQLHGYLSQEYLKFQGRYLENH 215
SCQ F H +L QG Y E+H
Sbjct: 231 SCQHFDSHCFLGNVKRICQGNYFESH 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,917,826
Number of Sequences: 28952
Number of extensions: 213600
Number of successful extensions: 667
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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