Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H09
         (86 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   2.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    18   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    18   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    18   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    18   7.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 72  IQD*HNSGNELSLF 31
           +QD H  G+E+++F
Sbjct: 235 VQDLHRRGHEIAVF 248


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 72  IQD*HNSGNELSLF 31
           +QD H  G+E+++F
Sbjct: 242 VQDLHRRGHEIAVF 255


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 53  VVTNCHCFM 27
           ++TNC CF+
Sbjct: 199 MLTNCICFV 207


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 53  VVTNCHCFM 27
           ++TNC CF+
Sbjct: 199 MLTNCICFV 207


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 53  VVTNCHCFM 27
           ++TNC CF+
Sbjct: 199 MLTNCICFV 207


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 53  VVTNCHCFM 27
           ++TNC CF+
Sbjct: 199 MLTNCICFV 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,638
Number of Sequences: 336
Number of extensions: 109
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 10
effective length of database: 119,225
effective search space used:  2146050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)