SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H09
         (86 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    21   5.1  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    21   5.1  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    21   6.8  

>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 42  IRYHCCVSLE 71
           +++H CVSLE
Sbjct: 129 VKFHACVSLE 138


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 42  IRYHCCVSLE 71
           +++H CVSLE
Sbjct: 278 VKFHACVSLE 287


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +3

Query: 15  FLISHKTVTIRYHCCV 62
           F ++HK + + Y  C+
Sbjct: 486 FFMTHKAIDLGYRVCI 501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,214
Number of Sequences: 2352
Number of extensions: 338
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 10
effective length of database: 540,459
effective search space used:  9728262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

- SilkBase 1999-2023 -