Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H06
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence si... 34 0.24
BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence si... 34 0.24
BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence si... 34 0.24
BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence si... 34 0.24
AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein. 34 0.24
AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens ... 34 0.24
BC121186-1|AAI21187.1| 729|Homo sapiens WDR90 protein protein. 30 3.9
BC121185-1|AAI21186.1| 730|Homo sapiens WDR90 protein protein. 30 3.9
AK126839-1|BAC86716.1| 190|Homo sapiens protein ( Homo sapiens ... 29 6.9
BC142693-1|AAI42694.1| 272|Homo sapiens Unknown (protein for MG... 29 9.1
BC141816-1|AAI41817.1| 272|Homo sapiens Unknown (protein for MG... 29 9.1
AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette, s... 29 9.1
AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette, s... 29 9.1
AL353685-2|CAH72443.1| 363|Homo sapiens ATP-binding cassette, s... 29 9.1
AK024328-1|BAB14887.1| 363|Homo sapiens protein ( Homo sapiens ... 29 9.1
AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette tr... 29 9.1
AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1 ... 29 9.1
AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette tr... 29 9.1
AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein. 29 9.1
AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding tr... 29 9.1
AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D receptor-inte... 29 9.1
AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein. 29 9.1
>BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 125 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 289
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 125 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 289
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 125 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 289
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 125 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 289
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 125 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 289
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ32981 fis, clone TESTI3000002, weakly similar to
L.mexicana lmsap2 gene for secreted acid phosphatase 2
(SAP2). ).
Length = 605
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 125 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 289
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC121186-1|AAI21187.1| 729|Homo sapiens WDR90 protein protein.
Length = 729
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 140 GAPWSCPTAPADHHTVRCSSQALQRARTGC 51
GA SCP +HH ++ + A ++AR GC
Sbjct: 536 GALRSCPVDLGEHHALQFTDLAFKQARDGC 565
>BC121185-1|AAI21186.1| 730|Homo sapiens WDR90 protein protein.
Length = 730
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 140 GAPWSCPTAPADHHTVRCSSQALQRARTGC 51
GA SCP +HH ++ + A ++AR GC
Sbjct: 537 GALRSCPVDLGEHHALQFTDLAFKQARDGC 566
>AK126839-1|BAC86716.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ44891 fis, clone BRAMY2044686. ).
Length = 190
Score = 29.5 bits (63), Expect = 6.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 219 FSLPVIGTLTIAPEVPSELIVRAPAC 142
FSLPVI + P +P + V PAC
Sbjct: 123 FSLPVISGAGLCPSIPVSISVLGPAC 148
>BC142693-1|AAI42694.1| 272|Homo sapiens Unknown (protein for
MGC:165011) protein.
Length = 272
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>BC141816-1|AAI41817.1| 272|Homo sapiens Unknown (protein for
MGC:164864) protein.
Length = 272
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberisiae) protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL353685-2|CAH72443.1| 363|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 363
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AK024328-1|BAB14887.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ14266 fis, clone PLACE1002437, highly similar to
ATP-BINDING CASSETTE TRANSPORTER 1. ).
Length = 363
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette
transporter-1 (ABC-1) protein.
Length = 2201
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 116 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 144
>AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1
sub-family A member 1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette
transporter 1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding
transporter 1 protein.
Length = 2201
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 116 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 144
>AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D
receptor-interacting protein protein.
Length = 873
Score = 29.1 bits (62), Expect = 9.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 475 VLEIGNLRNAGHVLSS-ESLCAEVMVIIVEQVDFASGGQLVTETRDVS 335
++ + L+ +G VL+S ESLC + + + F GG +V T D S
Sbjct: 187 LVTVSLLKPSGQVLTSTESLCRLRARVALADIAFTGGGNIVVATADGS 234
>AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 307 DIVVCQSSCSGSQLHLVSEINGAKSTELV 221
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,963,202
Number of Sequences: 237096
Number of extensions: 1667928
Number of successful extensions: 4073
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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