Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H05
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 449  NEQLLSIITYYCPEFDAALPASDCDWSPGPTT 354
            N  ++ I+T   P       ++   W+PG TT
Sbjct: 1333 NVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTT 1364


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 27  PRPPHCPFFGGNARALLEFRR 89
           P PP  PF+ G +  L  ++R
Sbjct: 205 PFPPPYPFYPGTSAMLAAYQR 225


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 207 PLTEPLVEPLTEPLVE 254
           PLT P  EPL  P  E
Sbjct: 105 PLTPPNSEPLVSPKSE 120


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 413 PEFDAALPASDCDWSPGPTTII 348
           P+F   L   +C+WS GP   +
Sbjct: 10  PQFGLQL---ECNWSSGPNATL 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,851
Number of Sequences: 336
Number of extensions: 1322
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)