Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H05
(493 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22856| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0) 38 0.003
SB_52967| Best HMM Match : zf-CCCH (HMM E-Value=4.7) 38 0.004
SB_50431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_19325| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.90
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_4786| Best HMM Match : VWA (HMM E-Value=3.5e-28) 28 4.8
SB_47864| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_38171| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_32092| Best HMM Match : Condensation (HMM E-Value=0.0014) 27 8.4
>SB_22856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F++PL P +EPLV P +EPL+ L+EP
Sbjct: 44 FSKPLVRPFSEPLVRPFSEPLMRQLSEP 71
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F+EPL PL++PLV P ++PLV +EP
Sbjct: 28 FSEPLIRPLSKPLVRPFSKPLVRPFSEP 55
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F+EPL PL++PLV P ++PLV +EP
Sbjct: 92 FSEPLIRPLSKPLVRPFSKPLVRPFSEP 119
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+EPL PL+ PL+ PL+EPLV +EP
Sbjct: 5 SEPLMRPLSGPLIRPLSEPLVRPFSEP 31
Score = 36.3 bits (80), Expect = 0.014
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL+EPLV P +EPL+ L++P
Sbjct: 15 PLIRPLSEPLVRPFSEPLIRPLSKP 39
Score = 35.9 bits (79), Expect = 0.018
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+EPL P +EPL+ PL++PLV ++P
Sbjct: 21 SEPLVRPFSEPLIRPLSKPLVRPFSKP 47
Score = 35.1 bits (77), Expect = 0.032
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F+EPL P +EPL+ L+EPL+ L+ P
Sbjct: 52 FSEPLVRPFSEPLMRQLSEPLMRPLSGP 79
Score = 34.7 bits (76), Expect = 0.042
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
++PL P ++PLV P +EPLV +EP
Sbjct: 37 SKPLVRPFSKPLVRPFSEPLVRPFSEP 63
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+EPL PL+ PL+ PL PLV +EP
Sbjct: 69 SEPLMRPLSGPLIRPLLGPLVRPFSEP 95
Score = 33.5 bits (73), Expect = 0.097
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F+EPL L+EPL+ PL+ PL+ L P
Sbjct: 60 FSEPLMRQLSEPLMRPLSGPLIRPLLGP 87
Score = 33.5 bits (73), Expect = 0.097
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL P +EPL+ PL++PLV ++P
Sbjct: 87 PLVRPFSEPLIRPLSKPLVRPFSKP 111
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
++PL P ++PLV P +EPLV ++P
Sbjct: 101 SKPLVRPFSKPLVRPFSEPLVRPFSKP 127
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV P +EPL+ L++P
Sbjct: 79 PLIRPLLGPLVRPFSEPLIRPLSKP 103
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLV 251
F++PL P +EPLV P ++PLV
Sbjct: 108 FSKPLVRPFSEPLVRPFSKPLV 129
Score = 31.1 bits (67), Expect = 0.52
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+EPL P EPL PL + L P
Sbjct: 19 PLSEPLVRPFSEPLIRPLSKPLVRP 43
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+ PL PL EPL P E L P
Sbjct: 11 PLSGPLIRPLSEPLVRPFSEPLIRP 35
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 210 LTEPLVEPLTEPLVEHLAEP 269
L+EPL+ PL+ PL+ L+EP
Sbjct: 4 LSEPLMRPLSGPLIRPLSEP 23
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL++PL P +PL P E L P
Sbjct: 99 PLSKPLVRPFSKPLVRPFSEPLVRP 123
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P +EPL PL +PL P + L P
Sbjct: 27 PFSEPLIRPLSKPLVRPFSKPLVRP 51
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+ PL PL+ PL P E L P
Sbjct: 75 PLSGPLIRPLLGPLVRPFSEPLIRP 99
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P +EPL PL +PL P + L P
Sbjct: 91 PFSEPLIRPLSKPLVRPFSKPLVRP 115
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P +EPL P EPL L E L P
Sbjct: 51 PFSEPLVRPFSEPLMRQLSEPLMRP 75
>SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 908
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F++PL PL+EPLV P ++PLV L++P
Sbjct: 733 FSKPLIRPLSEPLVRPFSKPLVRPLSKP 760
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL P +EPL+ PL+EPL+ L+EP
Sbjct: 848 PLVRPFSEPLIRPLSEPLIRPLSEP 872
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+E L PL+EPL+ PL++PLV L+EP
Sbjct: 646 SESLMRPLSEPLIRPLSKPLVRPLSEP 672
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLV 251
F+EPL PL+EPL+ PL+EPL+
Sbjct: 853 FSEPLIRPLSEPLIRPLSEPLM 874
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAE 266
+EPL PL++PLV PL+EPL+ L+E
Sbjct: 654 SEPLIRPLSKPLVRPLSEPLMRPLSE 679
Score = 36.7 bits (81), Expect = 0.010
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F++PL P ++PL+ PL+EPLV ++P
Sbjct: 725 FSKPLVRPFSKPLIRPLSEPLVRPFSKP 752
Score = 36.3 bits (80), Expect = 0.014
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL++PL PL EPL PL EHL P
Sbjct: 660 PLSKPLVRPLSEPLMRPLSEHLIRP 684
Score = 36.3 bits (80), Expect = 0.014
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F++PL P +EPL+ PL+ PL+ L+EP
Sbjct: 693 FSKPLVRPFSEPLMRPLSGPLILPLSEP 720
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
++PL PL+EPL+ PL+E L+ L+EP
Sbjct: 662 SKPLVRPLSEPLMRPLSEHLIRPLSEP 688
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F+EPL PL+ PL+ PL+EPL+ ++P
Sbjct: 701 FSEPLMRPLSGPLILPLSEPLMRPFSKP 728
Score = 35.5 bits (78), Expect = 0.024
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+EPL P ++PLV P ++PL+ L+EP
Sbjct: 718 SEPLMRPFSKPLVRPFSKPLIRPLSEP 744
Score = 33.9 bits (74), Expect = 0.073
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+EPL PL+E L+ PL+EPL+ ++P
Sbjct: 670 SEPLMRPLSEHLIRPLSEPLMRPFSKP 696
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEPGPSYD 284
+EPL P ++PLV PL++PL+ ++ P YD
Sbjct: 742 SEPLVRPFSKPLVRPLSKPLIRPFSQV-PLYD 772
Score = 33.5 bits (73), Expect = 0.097
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+EPL P ++PLV P +EPL+ L+ P
Sbjct: 686 SEPLMRPFSKPLVRPFSEPLMRPLSGP 712
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
+E L PL+EPL+ P ++PLV +EP
Sbjct: 678 SEHLIRPLSEPLMRPFSKPLVRPFSEP 704
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+EPL PL +PL PL E L P
Sbjct: 652 PLSEPLIRPLSKPLVRPLSEPLMRP 676
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTE-PLVEHLAEP 269
F++PL PL++PL+ P ++ PL +H P
Sbjct: 749 FSKPLVRPLSKPLIRPFSQVPLYDHSQNP 777
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEP 269
+PL PL+ PLV P +EPL+ L+EP
Sbjct: 840 DPL-RPLSGPLVRPFSEPLIRPLSEP 864
Score = 31.1 bits (67), Expect = 0.52
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL+EPL+ P ++PLV ++P
Sbjct: 712 PLILPLSEPLMRPFSKPLVRPFSKP 736
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+EPL PL E L PL E L P
Sbjct: 668 PLSEPLMRPLSEHLIRPLSEPLMRP 692
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+EPL P +PL PL + L P
Sbjct: 740 PLSEPLVRPFSKPLVRPLSKPLIRP 764
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+ PL P EPL PL E L P
Sbjct: 844 PLSGPLVRPFSEPLIRPLSEPLIRP 868
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHL 260
P +EPL PL EPL PL E L
Sbjct: 852 PFSEPLIRPLSEPLIRPLSEPL 873
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+EPL P +PL P E L P
Sbjct: 684 PLSEPLMRPFSKPLVRPFSEPLMRP 708
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P ++PL P +PL PL E L P
Sbjct: 724 PFSKPLVRPFSKPLIRPLSEPLVRP 748
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P ++PL PL EPL P + L P
Sbjct: 732 PFSKPLIRPLSEPLVRPFSKPLVRP 756
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+E L PL EPL P + L P
Sbjct: 676 PLSEHLIRPLSEPLMRPFSKPLVRP 700
>SB_52967| Best HMM Match : zf-CCCH (HMM E-Value=4.7)
Length = 226
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL P +EPL+ PL+EPL+ L+EP
Sbjct: 166 PLVRPFSEPLIRPLSEPLIRPLSEP 190
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLV 251
F+EPL PL+EPL+ PL+EPL+
Sbjct: 171 FSEPLIRPLSEPLIRPLSEPLM 192
Score = 34.7 bits (76), Expect = 0.042
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 186 FAEPLAEPLTEPLVEPLTEPLVEHLAEP 269
F++PL P+ EPL+ P ++PL +H P
Sbjct: 28 FSKPLIRPILEPLMRPFSKPLCDHSQNP 55
Score = 31.9 bits (69), Expect = 0.30
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL++PL+ P ++PL+ + EP
Sbjct: 15 PLMRPLSKPLMRPFSKPLIRPILEP 39
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEP 269
+PL PL+ PLV P +EPL+ L+EP
Sbjct: 158 DPL-RPLSGPLVRPFSEPLIRPLSEP 182
Score = 31.1 bits (67), Expect = 0.52
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
++PL P ++PL+ P+ EPL+ ++P
Sbjct: 21 SKPLMRPFSKPLIRPILEPLMRPFSKP 47
Score = 30.7 bits (66), Expect = 0.68
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAEP 269
++PL PL+ PL+ PL++PL+ ++P
Sbjct: 5 SKPLMRPLSGPLMRPLSKPLMRPFSKP 31
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL+ PL P EPL PL E L P
Sbjct: 162 PLSGPLVRPFSEPLIRPLSEPLIRP 186
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHL 260
P +EPL PL EPL PL E L
Sbjct: 170 PFSEPLIRPLSEPLIRPLSEPL 191
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL++PL P +PL P++E L P
Sbjct: 19 PLSKPLMRPFSKPLIRPILEPLMRP 43
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL++PL PL PL PL + L P
Sbjct: 3 PLSKPLMRPLSGPLMRPLSKPLMRP 27
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAE--PGPSYD 284
P ++PL P++EPL P + L + P YD
Sbjct: 27 PFSKPLIRPILEPLMRPFSKPLCDHSQNPLYD 58
>SB_50431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 41 PLVTPLVTPLVTPLVTPLVTPLVTP 65
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 45 PLVTPLVTPLVTPLVTPLVTPLVTP 69
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 49 PLVTPLVTPLVTPLVTPLVTPLVTP 73
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 53 PLVTPLVTPLVTPLVTPLVTPLVTP 77
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 57 PLVTPLVTPLVTPLVTPLVTPLVTP 81
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 61 PLVTPLVTPLVTPLVTPLVTPLVTP 85
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 65 PLVTPLVTPLVTPLVTPLVTPLVTP 89
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL PLV L P
Sbjct: 69 PLVTPLVTPLVTPLVTPLVTPLVTP 93
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV PL P+V L P
Sbjct: 21 PLVTPLVTPLVTPLVTPMVTPLVTP 45
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV P+ PLV L P
Sbjct: 25 PLVTPLVTPLVTPMVTPLVTPLVTP 49
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL P+V PL PLV L P
Sbjct: 29 PLVTPLVTPMVTPLVTPLVTPLVTP 53
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL P+ PLV PL PLV L P
Sbjct: 33 PLVTPMVTPLVTPLVTPLVTPLVTP 57
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P+ PL PLV PL PLV L P
Sbjct: 37 PMVTPLVTPLVTPLVTPLVTPLVTP 61
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAE 266
PL PL PLV PL PLV E
Sbjct: 77 PLVTPLVTPLVTPLVTPLVPRSGE 100
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHL 260
PL PL PLV PL PLV L
Sbjct: 73 PLVTPLVTPLVTPLVTPLVTPL 94
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL PL PLV L PLV L P
Sbjct: 5 PLVTPLVTPLVTSLVTPLVTPLVTP 29
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
PL L PLV PL PLV L P
Sbjct: 13 PLVTSLVTPLVTPLVTPLVTPLVTP 37
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 198 LAEPLTEPLVEPLTEPLVEHLAEP 269
L PL PLV PL PLV + P
Sbjct: 18 LVTPLVTPLVTPLVTPLVTPMVTP 41
>SB_19325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 30.3 bits (65), Expect = 0.90
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 72 LLEFRRSRGCGLRFKRRFLEL 134
L++FR S+G GL FKR+FL++
Sbjct: 326 LVDFRLSKGDGLEFKRQFLKI 346
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAE 266
AEP EP EP +EP EP +E + E
Sbjct: 595 AEPEPEPEPEPEIEPELEPELETIPE 620
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +3
Query: 201 AEPLTEPL---VEPLTEPLVEHLAEPGPSYDCL 290
+EP TEPL EP TEP EH+ CL
Sbjct: 1142 SEPTTEPLRTTPEPTTEPTTEHVTTVPRRRGCL 1174
>SB_4786| Best HMM Match : VWA (HMM E-Value=3.5e-28)
Length = 444
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 195 PLAEP-LTEPLVEPLTEPLVE 254
PLA P + EPL PL EPL+E
Sbjct: 164 PLASPPIEEPLFSPLEEPLLE 184
>SB_47864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAE--PGP 275
EP EP P +E +TEP + H E PGP
Sbjct: 157 EPCTEPEMIPELETITEPEIIHEPETIPGP 186
>SB_38171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAE--PGP 275
EP EP P +E +TEP + H E PGP
Sbjct: 23 EPCTEPEMIPELETITEPEIIHEPETIPGP 52
>SB_32092| Best HMM Match : Condensation (HMM E-Value=0.0014)
Length = 450
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEP 269
P++ PL+ P+ PL E L +H+ P
Sbjct: 226 PMSSPLSSPMSPPLLELLKQHIELP 250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,672,884
Number of Sequences: 59808
Number of extensions: 153299
Number of successful extensions: 602
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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