Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H05
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024770-7|AAP13756.1| 411|Caenorhabditis elegans Checkpoint ki... 32 0.20
AC024770-6|AAF59485.2| 503|Caenorhabditis elegans Checkpoint ki... 32 0.20
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.0
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 28 4.2
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 28 4.2
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 28 4.2
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 28 4.2
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 28 4.2
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 28 4.2
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 28 4.2
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 27 7.4
AF036689-1|AAB88320.1| 186|Caenorhabditis elegans Hypothetical ... 27 7.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 7.4
>AC024770-7|AAP13756.1| 411|Caenorhabditis elegans Checkpoint
kinase protein 1, isoformb protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 66 RALLEFRRSRGCGLRFKRRFLEL 134
R +++FRRSRG G++FK+ F+++
Sbjct: 342 RVMVDFRRSRGDGIQFKKMFMDV 364
>AC024770-6|AAF59485.2| 503|Caenorhabditis elegans Checkpoint
kinase protein 1, isoforma protein.
Length = 503
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 66 RALLEFRRSRGCGLRFKRRFLEL 134
R +++FRRSRG G++FK+ F+++
Sbjct: 434 RVMVDFRRSRGDGIQFKKMFMDV 456
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 195 PLAEPLTEPLVEPLTEPLVEHLAEPGP 275
P+ EP+ EP+ EP+ E E ++EP P
Sbjct: 113 PVPEPVPEPVPEPVPESTPEPISEPLP 139
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEP 269
EP+ EP+ E EP++EPL EP
Sbjct: 120 EPVPEPVPESTPEPISEPLPVVQEEP 145
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHL--AEPGPSYDCL 290
EP+ EP+ EP+ E EP+ E L + P+ D L
Sbjct: 116 EPVPEPVPEPVPESTPEPISEPLPVVQEEPASDSL 150
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 87 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 129
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 87 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 129
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 65 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 107
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 65 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 107
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 87 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 129
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 87 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 129
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +3
Query: 192 EPLAEPLTEPLVEPLTEPLVEHLAEPGPSYDCL*YV*AASPARDQ 326
EP EP EP EP+ EP E EP P + V SP R+Q
Sbjct: 87 EPEVEPEPEP--EPVPEPEPEPEPEPEPVVEKEEEVVVESPPREQ 129
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 377 DWSPGPTTIILITNNHHLISCGRRS 303
DW PG T + L N+ +++ G +S
Sbjct: 864 DWKPGNTVLTLSANHQYILISGNQS 888
>AF036689-1|AAB88320.1| 186|Caenorhabditis elegans Hypothetical
protein C50A2.3 protein.
Length = 186
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 443 QLLSIITYYCPEFDAALPASDCDWSP 366
Q L+I Y P ++A LP+S+C +P
Sbjct: 140 QPLNIQYLYPPRYEATLPSSECKQAP 165
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 189 AEPLAEPLTEPLVEPLTEPLVEHLAE---PGPS 278
A P P+T+P V+P P VEH E PGP+
Sbjct: 1712 ATPAPAPVTQPAVQPAPGP-VEHRYEIPAPGPA 1743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,054,600
Number of Sequences: 27780
Number of extensions: 114442
Number of successful extensions: 462
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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