Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H04
         (387 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30630| Best HMM Match : Hydrolase (HMM E-Value=2.5e-05)             28   3.1  
SB_7994| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.3  
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_29511| Best HMM Match : CHGN (HMM E-Value=0.00037)                  26   9.3  

>SB_30630| Best HMM Match : Hydrolase (HMM E-Value=2.5e-05)
          Length = 839

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 292 QEAYAYKMNVNFLASGANNVGVGSAGSGIYS 384
           Q++++    VN LA+  N   +G  GSGIYS
Sbjct: 533 QQSWSRVTCVNLLAANQNQPALGMWGSGIYS 563


>SB_7994| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 907

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -2

Query: 359 PTPTLLAPEARKFTFILYAYASWIXHSQSRYGNSGRNPQWV 237
           P   L+A     +T  +Y Y S     QSRY   G +  WV
Sbjct: 277 PVAHLVATTGEDYTVRVYDYLSKKQMCQSRYSTGGTSLLWV 317


>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1353

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 298  AYAYKMNVNFLASGANNVGVGSAGSGIYS 384
            ++A  + VNFLA+  +     + GSGIYS
Sbjct: 1092 SWARGIGVNFLAANTHVPSFANTGSGIYS 1120


>SB_29511| Best HMM Match : CHGN (HMM E-Value=0.00037)
          Length = 955

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 241 HCGFLPELPYLDW 279
           HCGF P +PY  W
Sbjct: 825 HCGFTPSIPYGFW 837


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,739,343
Number of Sequences: 59808
Number of extensions: 247015
Number of successful extensions: 533
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 669365910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)