Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_H03
         (628 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF175759-1|AAF03697.1|  321|Homo sapiens transmembrane tryptase ...    30   7.7  
AF175522-1|AAF03695.1|  321|Homo sapiens transmembrane tryptase ...    30   7.7  
AE006466-4|AAK61269.1|  321|Homo sapiens HS transmembrane trypta...    30   7.7  

>AF175759-1|AAF03697.1|  321|Homo sapiens transmembrane tryptase
           protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 490 LQTVSTQPTVKASILGLGLPQRSEENCHNCQAWQSGW 600
           L  +S   T+ + IL + LP+ S++ C   + W +GW
Sbjct: 128 LVELSVPVTLSSRILPVCLPEASDDFCPGIRCWVTGW 164


>AF175522-1|AAF03695.1|  321|Homo sapiens transmembrane tryptase
           protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 490 LQTVSTQPTVKASILGLGLPQRSEENCHNCQAWQSGW 600
           L  +S   T+ + IL + LP+ S++ C   + W +GW
Sbjct: 128 LVELSVPVTLSSRILPVCLPEASDDFCPGIRCWVTGW 164


>AE006466-4|AAK61269.1|  321|Homo sapiens HS transmembrane tryptase;
           gene name TMT; AF175522_1 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 490 LQTVSTQPTVKASILGLGLPQRSEENCHNCQAWQSGW 600
           L  +S   T+ + IL + LP+ S++ C   + W +GW
Sbjct: 128 LVELSVPVTLSSRILPVCLPEASDDFCPGIRCWVTGW 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,057,272
Number of Sequences: 237096
Number of extensions: 1568509
Number of successful extensions: 2612
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2612
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)