Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H02
(571 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 101 5e-22
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 76 2e-14
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 59 3e-09
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 51 8e-07
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 50 1e-06
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 44 1e-04
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 43 2e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 5e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 39 0.002
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 38 0.008
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 37 0.010
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 35 0.041
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 35 0.041
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.071
SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026) 34 0.071
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 33 0.12
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.12
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 33 0.12
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 31 0.50
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 31 0.50
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 31 0.66
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 31 0.88
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 31 0.88
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 31 0.88
SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 30 1.2
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 30 1.2
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 30 1.5
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.0
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37414| Best HMM Match : GLTT (HMM E-Value=0.00024) 29 2.7
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 28 6.2
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5) 27 8.2
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 103 bits (247), Expect = 1e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
+VY+GN+G NASK EIE+ F +G +R+VWVARNPPGFAF FED RDAED+VR LDG
Sbjct: 3 RVYIGNIGDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDGRY 62
Query: 306 CCGTRIRVEM 335
CG R RVE+
Sbjct: 63 ICGQRARVEL 72
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 102 bits (245), Expect = 2e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
KVY+G+LG NASK EIE F YG +++VWVARNPPGFAF F+D RDAED+VR LDG
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92
Query: 306 CCGTRIRVEM 335
CG R+RVE+
Sbjct: 93 ICGQRVRVEL 102
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 101 bits (241), Expect = 5e-22
Identities = 44/72 (61%), Positives = 54/72 (75%)
Frame = +3
Query: 117 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 296
++ K+YVGNLG NA E+E+ F K+G + VWVARNPPGFAFVE+ED RDAE++VR LD
Sbjct: 2 MTTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELD 61
Query: 297 GTRCCGTRIRVE 332
G C IRVE
Sbjct: 62 GANVCDRTIRVE 73
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 75.8 bits (178), Expect = 2e-14
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = +3
Query: 123 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP---PGFAFVEFEDPRDAEDSVRGL 293
C+VYVGNL + + ++ IF KYG+I +V + P FAFVEFEDPRDAED+V+G
Sbjct: 261 CRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGR 320
Query: 294 DGTRCCGTRIRVE 332
DG G RIRVE
Sbjct: 321 DGHEFDGYRIRVE 333
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +3
Query: 117 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 296
++C+VY+G L ++ ++ + F YG +R++ + N + FVEFED RDA+D+V +
Sbjct: 1 MNCRVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN---YGFVEFEDDRDADDAVYECN 57
Query: 297 GTRCCGTRIRVE 332
G G RI VE
Sbjct: 58 GKEMLGERILVE 69
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
++ + NL + S +++ + G++ + G +EF RD + +++ LDG
Sbjct: 98 RMTIENLSSRVSWQDLKDFCRQVGDVTYGDAHKQRQGEGVIEFSCKRDLKRALKKLDGEE 157
Query: 306 CCGTRIRV 329
G RIR+
Sbjct: 158 LNGKRIRL 165
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +3
Query: 168 EIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVE 332
++EK YG IR++ + R G+ FVEF+D RDAED+V L+G G R+ VE
Sbjct: 704 DVEKFLRGYGKIRDISLKR---GYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVE 755
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 308
V V NL + S +++ F KYG + + G VEFE D ++ LD T
Sbjct: 800 VIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLDDTEL 859
Query: 309 CGTRIRV 329
G RIRV
Sbjct: 860 GGRRIRV 866
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRG 290
K+YV +L N +K +++IFS YG ++ V + + GFA+VE+ DP + E +++
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKH 1217
Query: 291 LDGTRCCGTRIRVE 332
+DG + G I V+
Sbjct: 1218 MDGGQIDGQEIAVQ 1231
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 120 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 299
S +VY G L + + ++EK YG +R + + G+ FVEF+D RDA+D V L+G
Sbjct: 4 STRVYFGRLPRDCRERDLEKFVRGYGRVREISMKL---GYGFVEFDDYRDADDCVYDLNG 60
Query: 300 TRCCGTR 320
G R
Sbjct: 61 RNLLGER 67
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 168 EIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEM 335
++++ K G + + G VEF D + +++ LD T G RIR+++
Sbjct: 127 DLKEYMGKVGEVTFADAHKRRQGEGVVEFATKDDMKTALKKLDDTEFFGKRIRLKI 182
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRDAEDSVRGLD 296
++V NL +A + EIE++FSK+G ++ V + N P G+ +VE+E A +V LD
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
Query: 297 GTRCCGTRIRVEM 335
T G I V +
Sbjct: 233 KTEVKGRTISVAL 245
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +3
Query: 123 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRDAEDSVR 287
CK Y+GNL ++ +++ FS+Y ++ +V V + P GFAFV F ++ ED++
Sbjct: 230 CKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAIN 288
Query: 288 GLDGTRCCGTRIRV 329
LDG G ++V
Sbjct: 289 ELDGQEFDGRSMKV 302
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
+++VG L ++E +F YG + + + F+E+EDPRDAE+++R + +
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT---AYGFIEYEDPRDAEEAMRRENNRK 63
Query: 306 CCGTRIRVE 332
G+RI VE
Sbjct: 64 LFGSRIVVE 72
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/90 (28%), Positives = 48/90 (53%)
Frame = +3
Query: 60 NHNLSN*FV*MMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 239
N+N +N + R++ C+++VGNL + + E++++F KYG + V++ + GF
Sbjct: 32 NYNRNNGAGYSSMKERKFTGRCRLFVGNL-IDCDEEEMKEMFKKYGEVAEVFINKEK-GF 89
Query: 240 AFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 329
F+ + AE + GLD G +RV
Sbjct: 90 GFIRLDTRLHAEAAKAGLDMATRKGRTLRV 119
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +3
Query: 108 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDA 272
E D + V NL + +++++F KYG++ ++++ R+ GFAFV F + RDA
Sbjct: 11 EIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDA 70
Query: 273 EDSVRGLDGT 302
ED++ +D T
Sbjct: 71 EDAMDCMDAT 80
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 123 CKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 299
C++++GNL T+ ++ ++E+IFS++G + + N F FV+FE + A+++V G
Sbjct: 46 CRIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHAN---FGFVQFETEKGADEAVAKEHG 102
Query: 300 TRCCGTRIRVEM 335
G +I V +
Sbjct: 103 RIINGKKIDVRI 114
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGFAFVEFEDPRDAEDSVRGLD 296
VYV N G + ++++I ++ G I ++ V +P GF FV FE P +AE++V L+
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 297 GTRCCGTRI 323
G G R+
Sbjct: 171 GKEIGGRRL 179
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +3
Query: 117 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 296
+S KVY G L A++ ++E + +G +R V G+A+V F++ +DA+ +V L+
Sbjct: 1 MSGKVYCGRLPATATEKDLENLVKVFGKVREVDFKE---GYAYVVFKENKDADRAVAALN 57
Query: 297 GTRCCGTRIRVE 332
+ G +I +E
Sbjct: 58 NSEFHGAKILME 69
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
+V V NL T A E+++ + G + R PG VEF D + ++ LD
Sbjct: 103 RVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPGEGVVEFTTEEDMKRAIASLDKCE 162
Query: 306 CCGTRIRV 329
G RIR+
Sbjct: 163 FYGKRIRL 170
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +3
Query: 99 RYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDP 263
+ R L C+VYVG++ + I F +G I + ++ +P GFAFVE++ P
Sbjct: 94 KQRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLP 153
Query: 264 RDAEDSVRGLDGTRCCGTRIRV 329
A+ ++ ++G G I+V
Sbjct: 154 EAAQLALEQMNGVLLGGRNIKV 175
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDSVRGL 293
++V N+ A + +I ++FS YG I+N+ V + G+A VE+E ++A+ ++ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 294 DGTRCCGTRIRVE 332
+G G I V+
Sbjct: 355 NGAEMLGQNISVD 367
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYG---NIRNVW--VARNPPGFAFVEFEDPRDAEDSVRGL 293
V+VGN+ AS+ ++++IFS+ G + R V+ P G+ F E++D A ++R L
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 294 DGTRCCGTRIRVE 332
+G G +RV+
Sbjct: 87 NGYELNGRALRVD 99
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGL 293
VYVGNL + + ++ K+F +YG + V + R+ G AF+ F D + A+++V +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 294 DGTRCCGTRIR 326
+ + G I+
Sbjct: 72 NKKQMFGRTIK 82
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 117 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 296
+S +VY+G L + +++K F YG + + G+ FVEF+ DAED+V +
Sbjct: 1 MSNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD-GYGFVEFDYSDDAEDAVYECN 59
Query: 297 GTRCCG 314
G + G
Sbjct: 60 GKKMLG 65
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN--------PPGFAFVEFEDPRDAEDS 281
K+++GNL S++ I KI ++G I + + P G+ FVEF+ DA +
Sbjct: 388 KLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKA 447
Query: 282 VRGLD 296
+RGL+
Sbjct: 448 LRGLN 452
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 117 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 248
L+ VYVGNL + YE++++FS+YG+I V + G+AF+
Sbjct: 613 LNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD-KGYAFI 655
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 90 MMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFED 260
+ +RY + + +YVGNL ++ I IF+K + + +P + FVEFE
Sbjct: 358 LRARYFPEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFET 417
Query: 261 PRDAEDSVRGLDGTRCCGTRIRV 329
DA+++ +D +++V
Sbjct: 418 HADAQEAKFRMDQRTVMDKKLKV 440
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 171 IEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 329
I+++FS+ GN+ VA NP GFAFV++ +AE R +G + G+ IRV
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRV 279
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR-----NPPGFAFVEFEDPRDAEDSVRGL 293
++VGNL ++ + + S YGNI +++ R + G+ FVE+ +A + + L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 294 DGT 302
T
Sbjct: 175 LNT 177
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/54 (24%), Positives = 34/54 (62%)
Frame = +3
Query: 171 IEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVE 332
++ +FS++GN+ +VW+ + F + +F + A+ +++GL G G +++++
Sbjct: 354 LKDVFSRFGNLIDVWMMKE-RNFGYAKFAAKQSADAAIQGLHGHDVLGMKLKID 406
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDAE 275
K++VG L +K +++ FSKYG + V + + P GFAFV+F+ +A+
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEAD 84
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 308
+YV N+ S+ +++ +F+KYG I V R+ + FV F A ++ G++G
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD---YGFVYFAKRESAVQAIDGINGAYI 60
Query: 309 CGTRIRVEM 335
G ++ V +
Sbjct: 61 DGCKLEVSL 69
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYG-NIRNVWVARNPP------------GFAFVEFEDPR 266
KVY GNL ++ E++ +F + +V + + P GF FV F +P
Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPE 110
Query: 267 DAEDSVRGLDGTRCCGTRIRV 329
DA+ +V+ L+G G +++
Sbjct: 111 DAQTAVKSLNGKEVQGRTLKI 131
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDAEDSVRGL 293
+YV N+ + E K F YGNI N + R+ P G FV ++ +A+ ++ L
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194
Query: 294 DGTRCCGTRIRVEM 335
GT G+ + +++
Sbjct: 195 SGTFFPGSTMGLQI 208
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +3
Query: 123 CKVYVGNLGTNASKYEIEKIFSKYGNIRNV-----WVARNPPGFAFVEFEDPRDAEDSVR 287
C +YV N+G +A++ I +F + G + V W + GF FV +A+++++
Sbjct: 275 CTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQ 334
Query: 288 GLDG 299
L+G
Sbjct: 335 TLNG 338
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 108 EWDLSCK--VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG--FAFVEFEDPRDAE 275
E+D C ++VGN+ + ++++ F +YG + +V + + P +AFV+F + A
Sbjct: 242 EFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAI 301
Query: 276 DSVRGLDGTRCCGTRIRV 329
+ R +D R++V
Sbjct: 302 QARRKMDREYVGRNRVKV 319
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 308
++VG + + S+ ++E+ F +YG + V V A V F+ A + + G
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKV-VINRVTNQALVSFDSVDSATIAHAQMKGRTM 388
Query: 309 CGTRIRVE 332
R+RVE
Sbjct: 389 FSRRVRVE 396
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPG--FAFVEFEDPRDA 272
++VGNL N + +I K F++YG + +V + R+ G +FV+F D R A
Sbjct: 8 LWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFVDIRSA 59
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +3
Query: 108 EWDLS-CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRD 269
+WD + +++ G+LG+ + + + F+KY + + R+ G+ FV F+DP D
Sbjct: 211 QWDPNDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPND 270
Query: 270 AEDSVRGLD 296
++R ++
Sbjct: 271 FIKAMREMN 279
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 34.3 bits (75), Expect = 0.071
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 219 ARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEM 335
A P G+AF+E+E RD + + DG + G RI V++
Sbjct: 43 ASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDV 81
>SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026)
Length = 284
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 147 GTNASKYEIEKIFS---KYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGT 317
G N K E+IF+ YGN+ V N PG V+ D +E +R L G
Sbjct: 220 GLNHEKMNCERIFNLFCLYGNVIKVKFLTNKPGACMVQMSDKIASEMIIRNLSGATIFDN 279
Query: 318 RIRV 329
+I +
Sbjct: 280 KINI 283
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +3
Query: 132 YVGNLGTNASKYEIEKIFSKYGNIRNV-----WVARNPPGFAFVEFEDPRDAEDSVRGLD 296
YVG L + + F +G+I +V + GF FVEFE D ++ ++
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 297 GTRCCGTRIRVEM 335
+ G IRV +
Sbjct: 68 ESELFGRTIRVNL 80
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYG---NIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 299
V++GNL +A + + F + G R + GF + +F D ++ L+G
Sbjct: 182 VFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSKEDYNKALE-LNG 240
Query: 300 TRCCGTRIRV 329
CCG IR+
Sbjct: 241 EDCCGREIRI 250
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDSVRGL 293
+YVG L S+ I ++F + G + NV + ++ G+ FVEF DA+ +++ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 294 DGTRCCGTRIRV 329
+ + G IRV
Sbjct: 75 NMIKVYGKPIRV 86
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 93 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR----NPPGFAFVEFED 260
M++ +E D + +Y+ NL N + +E +FSKYG + + + R N G F E
Sbjct: 170 MAKQQEQDPT-NLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFARMES 228
Query: 261 PRDAEDSVR 287
E ++
Sbjct: 229 AEKCEQVIK 237
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGL 293
+Y+ L N + ++ ++ KYG I + + G+ FV+FE P A+ +V L
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAAL 161
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 93 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNI 203
+S+Y+ CKV+VGN+G E++ F +G++
Sbjct: 69 ISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDV 105
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRG 290
K+Y+GNL N+ + EIE+ F ++G + V + R+ GF FV + ++
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 291 LDGTRCCGTRIRVEM 335
++ + G I V +
Sbjct: 69 MNQSSVGGRNITVAL 83
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEK----IFSKYGNIRNVWVARNPP--GFAFVEFEDPRDAEDSVRG 290
+Y+ NL K E++K IFS++G I ++ + G AFV F+D A +++R
Sbjct: 9 IYIKNLNEKIKKEELKKSLYAIFSQFGPILDIVALKTLKMRGQAFVVFKDIGSATNALRS 68
Query: 291 LDG 299
+ G
Sbjct: 69 MQG 71
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNV 212
V+VGNL K ++K FSKYG + +V
Sbjct: 23 VFVGNLPLTLKKKALKKYFSKYGEVESV 50
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG-----FAFVEFEDPRDAEDSVRGL 293
++V L + ++E IFS++G I + V R+ +AF+EFE D E + +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 294 DGTRCCGTRIRVE 332
D RI V+
Sbjct: 182 DNVLIDDRRIHVD 194
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 308
VY+ NL + ++ ++++ +S+YG + V ++ +AFV F + A ++ DG
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKD---YAFVHFTERDHALKAIEETDGKEM 387
Query: 309 CGTRIRVEM 335
G +I +
Sbjct: 388 DGLKIEASL 396
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 31.1 bits (67), Expect = 0.66
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG----FAFVEFEDPRDAEDSVRGLD 296
++VGNL T S ++ F K+G + +V + R G +AFV+F D A + +
Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKCAMQ 298
Query: 297 GTRCCG 314
G +C G
Sbjct: 299 G-QCIG 303
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
+++VG LG S E+E+ F ++G IR + R A++ ++ A + R + G +
Sbjct: 319 RLWVGGLGPWISIPELEREFDRFGAIRRI-DYRKGGDHAYILYDSLDAASVAAREMRGFQ 377
Query: 306 CCGTRIRVE 332
R+R++
Sbjct: 378 MGDRRLRID 386
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +3
Query: 114 DLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRDAEDS 281
D+S +++V ++ E+ F +YG ++ + R+ G+AF+ FE ++ D
Sbjct: 5 DISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFES-QEVADG 63
Query: 282 VR---GLD 296
+R GLD
Sbjct: 64 LRDNKGLD 71
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +3
Query: 90 MMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEF 254
+ S + D V++GNL + + + ++F+ GN+ +V + R+ GF +V F
Sbjct: 45 LASNDKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLF 104
Query: 255 EDPRDAEDSVRGLDGTRCCGTRIRV 329
E +DA ++ G +IRV
Sbjct: 105 ES-KDAVVFALKMNNAEFKGRKIRV 128
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 120 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV 212
S +V++GNL + ++ ++FSKYG I +
Sbjct: 356 SHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR----NPPGFAFVEFEDPRDAEDSVRGLD 296
+Y+ + + K +E +F YG I ++ + R GF +V +E +AE + R L
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRTQTGKSKGFGYVTYE---NAESAQRALA 121
Query: 297 GT 302
GT
Sbjct: 122 GT 123
>SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 305
++ V NL T A +++ + G + ++ G +F + D +++ LDGT
Sbjct: 344 RLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVGEGVCDFSNESDMLYALKKLDGTE 403
Query: 306 CCGTRIRV 329
G RIR+
Sbjct: 404 LFGKRIRL 411
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 234 GFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 329
GF FV E+ D ED R DG G R++V
Sbjct: 84 GFGFVTLENQEDLEDVTRKFDGFEYEGRRLKV 115
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +3
Query: 171 IEKIFSKYGNIRNVWVAR-----NPPGFAFVEFEDPRDAEDSVR 287
++K+FS++G + V + R GFAF+EFE + AE V+
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQ 147
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Frame = +3
Query: 150 TNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAE----DSVRGLDGT 302
T AS + + F K+G ++ V R+P GF F+ F+DP+ + + LDG
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Query: 303 RCCGTRIRV 329
+ T ++
Sbjct: 177 KMVTTTKKI 185
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 138 GNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 299
G L + I ++FS YG + V V ++FV ++ +A +++R L+G
Sbjct: 55 GGLMCGVDRESITRVFSLYGTLERV-VMLPQRSYSFVSYKSHNNALNAMRNLNG 107
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 129 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 302
++V L A+ + K+FS YG I N+ + + G+ FV + +A ++ L+GT
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIEL-KLDKGYGFVNMSNYEEACHAICCLNGT 330
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +3
Query: 108 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEF 254
E ++ K++VG L + ++ + + F+++G + +V++ + F FV F
Sbjct: 194 ELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFVTF 242
>SB_37414| Best HMM Match : GLTT (HMM E-Value=0.00024)
Length = 286
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 155 VCSKISNVYFTREIPLAVSGHHSNKLITQIVI 60
+CS+IS F +P+ VSG +++ Q VI
Sbjct: 158 ICSRISRTLFANSVPMFVSGTVHQRVLFQWVI 189
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 436 LFDDGHHLYVDPVPLVIDAADLTARTDTN 522
L+D HL VDP+ V+ L +RT++N
Sbjct: 341 LYDISLHLNVDPIYCVLTLKSLVSRTNSN 369
>SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 212 HISYVTIFRKYFFYFILGRVCSKISNV---YFTREIPLAVSGHHSNK 81
+ S+V + K F FILG + S +SN+ F L V HH K
Sbjct: 86 YASFVMVGGKLLFGFILGNIASTLSNLEMKQFGYRKKLEVVKHHLKK 132
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +3
Query: 126 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA------RNPP-GFAFVEFEDPRDAEDSV 284
++ + NL N ++ +++ FS +G + V RN GF FV+F + DA ++
Sbjct: 248 RLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKAL 307
Query: 285 RGLDGTRCCGTRIRVE 332
++ + G + V+
Sbjct: 308 EEMNAKKILGRPVAVD 323
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +3
Query: 114 DLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFED 260
D K++VG L + + + F YG + +V V + GF +V F D
Sbjct: 11 DPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFAD 64
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 192 YGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVE 332
YG I NV + R+ GF F+ +ED R +V +G + G IRV+
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVD 53
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +3
Query: 102 YREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDS 281
Y W ++ V N TN E +S G W N F F E+ DP + +
Sbjct: 48 YGSWPINTNVVPANAATNTRASSNE--YSAIGAESTAW---NAGSFGFCEYSDPEASLRA 102
Query: 282 VR 287
+R
Sbjct: 103 IR 104
>SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5)
Length = 563
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 175 SISYLDAFVPRFPTYTLQERSHSRYLDIIQT 83
+I YL ++P P + + H R L I++T
Sbjct: 298 NIRYLGEYIPESPRFCISAGDHERALSILKT 328
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,241,225
Number of Sequences: 59808
Number of extensions: 296187
Number of successful extensions: 721
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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