Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_H01
(444 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 0.98
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 3.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 4.0
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 4.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 5.2
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 5.2
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 5.2
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 6.9
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 21 6.9
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 20 9.2
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 20 9.2
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.4 bits (48), Expect = 0.98
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 268 CSTGSTPGKDCHVTCNPLLTDDISVAATCAKKI 366
C G T GK CH N + TC KI
Sbjct: 56 CQPGFT-GKYCHENINDCKVNPCENGGTCVDKI 87
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.8 bits (44), Expect = 3.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 386 SNLWRWXIFLAHVAATLMSSVSNGLQVTWQSFPGVD 279
SN++R F+ L NGL V W+ G D
Sbjct: 611 SNVFRMNQFVYDAIDFLREFQFNGLDVDWEYPRGAD 646
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 4.0
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = -1
Query: 330 VSQ*RITSHVAILSRSGPGAAPVLVIDLEEPVVSRSVLIHFTNLVGKPSAFVLDKADP 157
VS IT H LS G P+L +E + + I +N V FVL DP
Sbjct: 1502 VSSNSITLH---LSAWSDGGCPMLYFVIEHKKKTSTEWIQVSNNVKLGQNFVLLDLDP 1556
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 230 ETTGSSRSMTNTGAAPGP 283
+T G+S + TG+AP P
Sbjct: 248 QTVGASFGLHATGSAPSP 265
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +1
Query: 232 DYGLFQINDQYWCSTGSTPGK 294
DY + YW G+ PGK
Sbjct: 2538 DYFNANFSLNYWIEKGADPGK 2558
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 362 FLAHVAATLMSSVSNGLQVTWQ 297
F+AHV + ++ +GL + W+
Sbjct: 1924 FIAHVVDFIETNNFDGLDLDWE 1945
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 362 FLAHVAATLMSSVSNGLQVTWQ 297
F+AHV A + +GL + W+
Sbjct: 2422 FIAHVLAFIEEWNFDGLDLDWE 2443
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.0 bits (42), Expect = 5.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 107 NPHLVXRFASQCKASAKRASNITYFDIMFPS 15
NP + R +QC+ + + S+ T I S
Sbjct: 84 NPRALRRLRTQCERAKRTLSSATQASIEIDS 114
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.0 bits (42), Expect = 5.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 107 NPHLVXRFASQCKASAKRASNITYFDIMFPS 15
NP + R +QC+ + + S+ T I S
Sbjct: 84 NPRALRRLRTQCERAKRTLSSATQASIEIDS 114
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 29 CRSTLYCSPFWHSLCIAMR 85
CR Y + + HSL I +R
Sbjct: 289 CRDCSYATKYCHSLKIHLR 307
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 29 CRSTLYCSPFWHSLCIAMR 85
CR Y + + HSL I +R
Sbjct: 47 CRDCSYATKYCHSLKIHLR 65
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 20.2 bits (40), Expect = 9.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 302 WQSFPGVDPVLHQYWSLIWKSP*SRDP 222
W + G+ + Y S++ + P ++DP
Sbjct: 243 WHAHTGLQKMDGLYGSVVIRQPPAKDP 269
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 20.2 bits (40), Expect = 9.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -2
Query: 302 WQSFPGVDPVLHQYWSLIWKSP*SRDP 222
W + G+ + Y S++ + P ++DP
Sbjct: 243 WHAHTGLQKMDGLYGSVVIRQPPAKDP 269
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,230
Number of Sequences: 336
Number of extensions: 2102
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9985735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -