Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_G21
(486 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 98 3e-21
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 75 3e-14
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 73 2e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 9e-09
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 49 2e-06
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 49 2e-06
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 48 3e-06
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 47 9e-06
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 46 1e-05
SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 41 6e-04
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_50991| Best HMM Match : Mito_carr (HMM E-Value=2e-14) 38 0.003
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.003
SB_17604| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.003
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 38 0.004
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.013
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.023
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.031
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 35 0.041
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_8638| Best HMM Match : PP2C (HMM E-Value=6.5e-32) 29 2.7
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_47365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_56399| Best HMM Match : DUF23 (HMM E-Value=1.9e-28) 27 6.2
SB_45633| Best HMM Match : DUF23 (HMM E-Value=3.2e-35) 27 6.2
SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 27 8.2
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_54977| Best HMM Match : MFS_1 (HMM E-Value=0.006) 27 8.2
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 98.3 bits (234), Expect = 3e-21
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 24/173 (13%)
Frame = +1
Query: 1 PLGGIAAINAMVFGAYGNTRRAMPNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQLA 180
PL G+ INA++FG G T R + N +QS C P+EL KTR Q+
Sbjct: 217 PLAGLGLINAIIFGVQGETLRRL-NGSGTMAQAISGAIAGGVQSIVCCPMELAKTRVQVQ 275
Query: 181 KPSERM-----------PSGAWAGARYILK----TGGYKALFRGLGITMARDSPAFAIYF 315
+++ A+ G+ LK + G + FRG+ IT RD PAFA+YF
Sbjct: 276 GQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYF 335
Query: 316 VSY----EAMT-RGDR----SVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVD 447
S+ E +T +G+ S +R+F +GGIAG LSW+L YP+D+VKS Q D
Sbjct: 336 GSFQYVCELLTPKGEHVDNLSPIRLFFSGGIAGTLSWILTYPVDMVKSCYQAD 388
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 74.9 bits (176), Expect = 3e-14
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Frame = +1
Query: 142 APVELVKTRQQLAKPSERMPSGAWAGARYIL----KTGGYKALFRGLGITMARDSPAFAI 309
APV+LVK + Q+ ++R + G L ++ G F+G +T RD P FA+
Sbjct: 52 APVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAV 111
Query: 310 YFVSYEAMTR------GDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDA-VGTF-- 462
YF YE + G R V AGG AG +SW +P DV+KSR+Q D +G F
Sbjct: 112 YFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKFRY 171
Query: 463 SGAWDCLI 486
G DC +
Sbjct: 172 KGMMDCAL 179
Score = 30.7 bits (66), Expect = 0.67
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +1
Query: 340 GDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDAV------GTFSGAWDCLI 486
G ++ ++ AG +AG L+ P+D+VK +LQ+ + G DCL+
Sbjct: 29 GSNTIGQIAFAGSVAGLAQVPLIAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLV 83
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 72.5 bits (170), Expect = 2e-13
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Frame = +1
Query: 130 SFACAPVELVKTRQQL-AKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFA 306
SF AP E +K Q+ A S SG +A + I G + +FRGL TM RD+
Sbjct: 135 SFLFAPAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMIRDTFGTG 194
Query: 307 IYFVSYEAM---------TRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDAVGT 459
+++++YE + +R D +++ +AGGIAG W L++P+D++K+R+Q+ +G
Sbjct: 195 VWYLTYEGLLMLMRSEGTSRDDIGTLQIVSAGGIAGLALWGLMFPVDMLKTRVQIAPMGR 254
Query: 460 F-SGAWDCL 483
+ GA D L
Sbjct: 255 YPRGARDVL 263
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +1
Query: 349 SVMRVFTAGGIAGALSWVLLYPIDVVKSRLQV------DAVGTFSGAWDCLI 486
S R AG ++G L P+D++K RLQ F GA DC +
Sbjct: 19 SPARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKPGETAPFKGAMDCFM 70
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 56.8 bits (131), Expect = 9e-09
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +1
Query: 136 ACAPVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYF 315
A AP++ +K Q+ S G +G + +L+ GG K+L+RG G + + +P I F
Sbjct: 153 ATAPLDRLKVLLQVQASSTNR-FGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESGIKF 211
Query: 316 VSYE---AMTRGDRSVMRV---FTAGGIAGALSWVLLYPIDVVKSRLQVDAVGTFSG 468
+YE + D + V AG +AG S +YP++V+K+RL + G + G
Sbjct: 212 FAYEKAKKLVGSDTKALGVTDRLLAGSMAGVASQTSIYPLEVLKTRLAIRKTGQYRG 268
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 136 ACAPVELVKTRQQLAKPSERMPSG--AWAGARYILKTGGYKALFRGLGITMARDSPAFAI 309
A P+ LV+TR Q + G + R I+ G+K L+RGL + +PA +I
Sbjct: 344 ASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFLKVAPAVSI 403
Query: 310 YFVSYEAMTRG 342
+V YE + G
Sbjct: 404 SYVVYENLRLG 414
Score = 34.7 bits (76), Expect = 0.041
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAI----- 309
P+E++KTR + K + G A I + G ++ +RGL ++ P I
Sbjct: 250 PLEVLKTRLAIRKTGQYR--GLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVY 307
Query: 310 -----YFVSYEAMTRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDAVGTFSGAW 474
++++Y D V+ + G + + YP+ +V++RLQ A G
Sbjct: 308 ETLKNFYLNYHKNQSADPGVLVLLACGTASSTCGQLASYPLSLVRTRLQAQAREKGGGQG 367
Query: 475 DCLI 486
D ++
Sbjct: 368 DNMV 371
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 50.4 bits (115), Expect = 8e-07
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Frame = +1
Query: 145 PVELVKTR--QQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFV 318
P+E +K + +P+ + G ++G R ILKT G+ +++GL T+ + I F
Sbjct: 157 PMETIKVKFIHDQTQPNPKY-KGFFSGVRTILKTEGFFGVYKGLTATVIKQGSNQMIRFF 215
Query: 319 SYEAMTR----GDRS----VMRVFTAGGIAGALSWVLLYPIDVVKSRLQV 444
Y + GD S ++ F GG+AGA S P+DVVK+R+Q+
Sbjct: 216 VYSNLKSWLQGGDSSKDIGAVKTFLIGGVAGAASVFGNTPVDVVKTRMQL 265
Score = 33.9 bits (74), Expect = 0.071
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 RSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVD---AVGTFSGAWDCL 483
R ++ AGGIAG L +P + VK++LQ+D A + G DC+
Sbjct: 38 RHPLKAILAGGIAGGLEICCTFPTEYVKTQLQLDEKAAKPIYRGPIDCV 86
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 48.8 bits (111), Expect = 2e-06
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Frame = +1
Query: 130 SFACAPVELVKTRQQLAKPSERMPSGAWAGARYILKTG-------GYKALFRGLGITMAR 288
+F P++L K++ Q+ R SGA R + G G + ++GL T+ R
Sbjct: 216 AFIEGPIDLFKSKMQVQ--IIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVR 273
Query: 289 DSPAFAIYFVSYEAM---------TRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQ 441
+ PA +F YE T D S + + T+G + G W L YP D+VKS +
Sbjct: 274 NIPANGFFFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAMGGFFYWFLTYPTDLVKSSMM 333
Query: 442 VD----AVGTFSGAWDC 480
D A+ + G DC
Sbjct: 334 ADHSDKALRKYHGYIDC 350
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 48.8 bits (111), Expect = 2e-06
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVSY 324
PV +VKTR + + A I G + L+ GL T+ARD+P +Y + Y
Sbjct: 449 PVTVVKTRYESGNFNYTSMRQALVS---IWTNEGGRGLYSGLVATVARDAPFSGLYLMFY 505
Query: 325 EAMTRGDRSVMRV--------FTAGGIAGALSWVLLYPIDVVKSRLQVD 447
+ R + +++V F G +AGA++ V+ P DVVK+RLQ++
Sbjct: 506 TQIKRRAKGLLQVGDLTSGQNFICGIMAGAMASVVTQPADVVKTRLQMN 554
Score = 31.9 bits (69), Expect = 0.29
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +1
Query: 124 LQSFACAPVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAF 303
+ S P ++VKTR Q+ P PS A I++ GG + LFRGL R +
Sbjct: 536 MASVVTQPADVVKTRLQM-NPY-MYPSNR-AAVVAIIEAGGIEGLFRGLVPRTVRRTLMS 592
Query: 304 AIYFVSYEAMTR 339
A+ + YE ++R
Sbjct: 593 AMAWTIYEEVSR 604
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +1
Query: 202 SGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVSYE----------AMTRGDRS 351
SG ARY++K G ++LF+GLG T+ +P+ AIYF Y A+ + D S
Sbjct: 775 SGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDMLNKSGALGKADGS 834
Query: 352 VMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDAVG 456
++ + T+ IA ++ + P+ +K+RLQ++ G
Sbjct: 835 LIHM-TSSAIAAFINHTVTNPLWFIKTRLQLENQG 868
Score = 30.7 bits (66), Expect = 0.67
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 229 ILKTGGYKALFRGLGITMARDSPAFAIYFVSYEAM 333
+L+ G++ L+ GLG + R P AI F +YE +
Sbjct: 982 VLREEGWRGLYGGLGTHVIRQVPNTAIMFFTYEGV 1016
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 370 AGGIAGALSWVLLYPIDVVKSRLQVDA 450
AGG+ G++ + P++V+++RLQ A
Sbjct: 711 AGGLGGSMGALATIPLEVIQTRLQSSA 737
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 46.8 bits (106), Expect = 9e-06
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Frame = +1
Query: 130 SFACAPVELVKTRQQLAKPSERMPSGAWAGA-RYILKTGGYKALFRGLGITMARDSPAFA 306
SF P++ VK Q+ K G R I + G + +++G+ +T RD P +
Sbjct: 152 SFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRDIPGWG 211
Query: 307 IYFVSYEAMTR---GDRSVMR-------VFTAGGIAGALSWVLLYPIDVVKSRLQVDAVG 456
F + E R G+++ + V +G IAG W P DV+K+R Q G
Sbjct: 212 AMFFTNELCHRAITGEKNHLTRHIGPGGVLVSGAIAGMAYWTAGLPADVLKTRYQTAPPG 271
Query: 457 TFSGAWDCL 483
+ D L
Sbjct: 272 RYGRVLDVL 280
Score = 44.8 bits (101), Expect = 4e-05
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +1
Query: 145 PVELVKTRQQ---LAKPSER-MPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIY 312
P++ +K R Q L KP E M ++ I++ G LFRG+ + + P +
Sbjct: 58 PLDTIKVRLQAMPLPKPGEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTVL 117
Query: 313 FV------SYEAMTRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVD-AVG--TFS 465
F SY+ D ++R AG IAG + +L P+D VK LQ++ A G ++
Sbjct: 118 FSCVSFVKSYKLPVSKDPELLRSLAAGMIAGVATSFVLTPLDRVKCILQIEKAFGGSSYG 177
Query: 466 GAWDCL 483
G DCL
Sbjct: 178 GPVDCL 183
Score = 30.3 bits (65), Expect = 0.88
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 334 TRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQ 441
TR SV++ AG AGA + ++ +P+D +K RLQ
Sbjct: 32 TRPKFSVLKNSIAGSAAGAAANLVGFPLDTIKVRLQ 67
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 46.4 bits (105), Expect = 1e-05
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Frame = +1
Query: 136 ACA-PVELVKTRQQLAKPSERMPSGAWAGARYI-LKTGGYKALFRGLGITMARDSPAFAI 309
AC P+++V++R ++ + R I +K GG KAL++G T+ PA I
Sbjct: 80 ACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLLTIVPAMGI 139
Query: 310 YFVSYEAM-------------TRGDR-----SVMRVFTAGGIAGALSWVLLYPIDVVKSR 435
F +E M T D S++ F GG+AGA+S + YP+DVV+ R
Sbjct: 140 GFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAGAVSQTIAYPLDVVRRR 199
Query: 436 LQV 444
+Q+
Sbjct: 200 MQL 202
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 223 RYILKTGGYKALFRGLGITMARDSPAFAIYFVSYE---AMTRGDRSVMRVFTAGGIAGAL 393
R I + G A F+G G M R P A+ F+SYE + + + AG +AG
Sbjct: 18 RAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVLQTSSPAINKLVAGSLAGMT 77
Query: 394 SWVLLYPIDVVKSRL 438
+ YP+D+V+SRL
Sbjct: 78 ACACTYPLDMVRSRL 92
Score = 27.1 bits (57), Expect = 8.2
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 145 PVELVKTRQQLAK--PSERMPSGAWAGARYILKTGGYK-ALFRGLGITMARDSPAFAIYF 315
P+++V+ R QLA P + + K G + L+RGL I R P AI F
Sbjct: 192 PLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVCPQVAIMF 251
Query: 316 VSYE 327
YE
Sbjct: 252 GVYE 255
>SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Frame = +1
Query: 157 VKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVSYEAMT 336
++ ++KP+ G ++ RYI +T G ++LF+GL + +P+ AIYF +Y+ +
Sbjct: 774 IEATSSVSKPTNFY--GVFSYGRYIARTEGARSLFKGLCPNLLAVTPSRAIYFTTYQKLK 831
Query: 337 R--------GDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVD 447
S M +G A ++ + P+ +K+RLQ+D
Sbjct: 832 EWLNNGGILAANSSMVYLVSGASAQIVNSTITNPLWFLKTRLQLD 876
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 346 RSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDA 450
RS++ AGG+ G+ +L P+DV+++RLQ A
Sbjct: 724 RSMIVDLVAGGLGGSTGVILTCPLDVIQTRLQSSA 758
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVSY 324
P L+K R Q+ + + + +G+ +++T G + L++G ++ A A Y +Y
Sbjct: 35 PANLIKIRLQVQRKTT-LYNGSLDAFTKVIRTEGVRGLYKGYLVSCA-GLFAGQCYITTY 92
Query: 325 EAM---TRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDAVG 456
E + T +R F AGG A + + P+D++ +L + G
Sbjct: 93 ELVRSKTAQYNYTIRGFLAGGCASIVGQTITVPVDIISQKLMIQGQG 139
Score = 31.5 bits (68), Expect = 0.38
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPS--GAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFV 318
PV+++ + + +R GA R G ++G ++ +P+ AI++
Sbjct: 125 PVDIISQKLMIQGQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSAIWWA 184
Query: 319 SYEAMTR--------GDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQ 441
SY T G ++ + ++G +AG + L P+DV+++RLQ
Sbjct: 185 SYGFYTGVIGNLSADGTHRLLVLGSSGVLAGVTAATLTNPLDVIRTRLQ 233
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 130 SFACAPVELVKTRQQLAKPSERMP------SGAWAGARYILKTGGYKALFRGLGITMARD 291
SF P EL+K R Q + + SG I++ G++ LFRG+ T AR+
Sbjct: 121 SFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWARE 180
Query: 292 SPAFAIYFVSYE 327
P + +F YE
Sbjct: 181 VPGYFFFFGGYE 192
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Frame = +1
Query: 124 LQSFACA-PVELVKTRQQLAKPSERMPSGAWAGARYILKT-GGYKALFRGLGITMARDSP 297
L + +C P+++V++R E G + I T GG AL+RG T P
Sbjct: 10 LTACSCTYPLDIVRSRLAFQVADEHTYCGICQTVKQIFMTEGGMVALYRGFTPTSLSMIP 69
Query: 298 AFAIYFVSYEA-----------MTR-GDRSVMRVFTA------GGIAGALSWVLLYPIDV 423
A I F ++E+ +TR + V TA G +AGA S L YP+DV
Sbjct: 70 AVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVLTAPGGLLCGALAGATSQTLAYPLDV 129
Query: 424 VKSRLQV 444
V+ R+Q+
Sbjct: 130 VRRRMQL 136
Score = 30.7 bits (66), Expect = 0.67
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 370 AGGIAGALSWVLLYPIDVVKSRL--QVDAVGTFSG 468
AGG+AG + YP+D+V+SRL QV T+ G
Sbjct: 4 AGGLAGLTACSCTYPLDIVRSRLAFQVADEHTYCG 38
Score = 27.1 bits (57), Expect = 8.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 145 PVELVKTRQQLA---KPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYF 315
P+++V+ R QLA + + + G + L+RGL I R P A+ F
Sbjct: 126 PLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCPQVAVMF 185
Query: 316 VSYEAM 333
YE +
Sbjct: 186 AVYEVV 191
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVSY 324
P L + Q A +E+ G AR I G + +++G+ T+ RD P A+YF+SY
Sbjct: 213 PAVLYFLQIQQASGAEKKYKGPIDCARQIYAQNGIRGVYKGVCATLLRDVPGTAMYFLSY 272
Query: 325 EAMTR 339
E + +
Sbjct: 273 EYLMK 277
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Frame = +1
Query: 280 MARDSPAFAIYFVSYEAMTR-GDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQV---- 444
MA DS A + E + S ++ F AGG G +P+D +K RLQ
Sbjct: 1 MADDSVAGTVEVAEIEKKEKKASSSGIKNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRP 60
Query: 445 --DAVGTFSGAWDC 480
F+G +DC
Sbjct: 61 KPGEKPMFTGTFDC 74
>SB_50991| Best HMM Match : Mito_carr (HMM E-Value=2e-14)
Length = 255
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 247 YKALFRGLGITMARDSPAFAIYF--------VSYEAMTRGDRSVMRVFTAGGIAGALSWV 402
+K +RGL + R+ P+ ++F V EA T+ +V F +G + GA
Sbjct: 122 FKEYYRGLTPILMRNGPSNVLFFGLRGRIKEVLPEAKTQVGNTV-NDFLSGAVLGACLST 180
Query: 403 LLYPIDVVKSRLQVDAVGTFSG 468
L YP++V K+ +Q G F+G
Sbjct: 181 LFYPVNVAKNHMQKQLGGEFTG 202
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 38.3 bits (85), Expect = 0.003
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Frame = +1
Query: 142 APVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVS 321
+P+E+VK Q+ E P G + K G KA ++G G++ R P A+ + +
Sbjct: 77 SPLEVVKVLAQVGT-QEAKP-GLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYAA 134
Query: 322 YEAMT-------RGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVDAV 453
+ + G+ S AG + ++ V +YP +V+K+RL V V
Sbjct: 135 FNRIVASLEDPHNGELSDSGSMLAGTSSTLIAMVTVYPCEVIKTRLTVQHV 185
Score = 36.3 bits (80), Expect = 0.013
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Frame = +1
Query: 145 PVELVKTRQ--QLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFV 318
P E++KTR Q S G + IL+ G AL++G+ + P F+
Sbjct: 172 PCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLGLFPFAGGSFL 231
Query: 319 SYEAM-----TRGDRSVMRV--FTAGGIAGALSWVLLYPIDVVKSRLQV 444
+Y+ + TR + S + F G +AGA + L +P D ++ ++Q+
Sbjct: 232 AYQILDKVDSTRTEPSATPICMFVNGCVAGAFAHTLSHPFDTIRKKMQL 280
>SB_17604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 247 YKALFRGLGITMARDSPAFAIYF--------VSYEAMTRGDRSVMRVFTAGGIAGALSWV 402
+K +RGL + R+ P+ ++F V EA T+ +V F +G + GA
Sbjct: 161 FKEYYRGLTPILMRNGPSNVLFFGLRGRIKEVLPEAKTQVGNTV-NDFLSGAVLGACLST 219
Query: 403 LLYPIDVVKSRLQVDAVGTFSG 468
L YP++V K+ +Q G F+G
Sbjct: 220 LFYPVNVAKNHMQKQLGGEFTG 241
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 38.3 bits (85), Expect = 0.003
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 8/155 (5%)
Frame = +1
Query: 46 YGNTRRAMPNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQLAKPSERMPSGAWAGAR 225
YG+T + NP L S A P E+VK R Q + R SG
Sbjct: 114 YGDTD--VQNPKILKKIAASITTGIMAVSVA-QPTEVVKIRFQA--DAGRYTSGTMGTYA 168
Query: 226 YILKTGGYKALFRGLGITMARDSPAFAIYFVSYEAMT--------RGDRSVMRVFTAGGI 381
I + G K L++G+ MAR V Y+++ D + +A G
Sbjct: 169 EIARNEGMKGLWKGVFPNMARLCTVNVTELVVYDSIKGLFLRKQWMADEFPLHFVSAFG- 227
Query: 382 AGALSWVLLYPIDVVKSRLQVDAVGTFSGAWDCLI 486
AG ++ + P+DVVK+R T+ DC +
Sbjct: 228 AGFVTTCVASPVDVVKTRYMNSPANTYKSGIDCAV 262
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 343 DRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQV 444
D S++ F + GIA +++ PID K RLQ+
Sbjct: 11 DPSILVKFCSAGIAASIAEAATIPIDTAKVRLQI 44
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMP-SGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVS 321
P+++V+ R Q+ + S W G + I+++ G+ LF+G+ + + +P I F
Sbjct: 701 PLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQFAV 760
Query: 322 YE 327
YE
Sbjct: 761 YE 762
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +1
Query: 352 VMRVFTAGGIAGALSWVLLYPIDVVKSRLQV---DAVGTFSGAWD 477
V ++F G +AGA++ YP+DVV+ R+Q+ + + +S WD
Sbjct: 682 VAKLF-CGAVAGAVAQSGTYPLDVVRRRMQMERGEGMFKYSSTWD 725
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 202 SGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVSYEAMTRG 342
SG I + G F+G G + R P A+ F +YE +G
Sbjct: 592 SGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKG 638
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 36.3 bits (80), Expect = 0.013
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPS---GAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYF 315
P+++V+ R + S R S G + R I G + L++GL ++ +P +
Sbjct: 48 PLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQ 107
Query: 316 VSYEAMTRGDRSVMRVFTA--------GGIAGALSWVLLYPIDVVKSRLQVD 447
Y+ M R++ F A G IAG ++ +++P+DVV+ ++QVD
Sbjct: 108 SVYDIMKL--RALDSAFAANSGTFLVCGAIAGMIAQTVVHPLDVVRRQMQVD 157
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 35.5 bits (78), Expect = 0.023
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +1
Query: 136 ACAPVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYF 315
A P+E++K R Q+ R G A + K G +A +R ++ + P ++F
Sbjct: 14 AMNPIEVIKQRLQMYGSPYR---GVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHF 70
Query: 316 VSYEAMTR-----GDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRL 438
YE + G AG AGA++ + P+DV K+ L
Sbjct: 71 TVYEYARKALNPLGGYDPKTHVIAGATAGAVASAITTPLDVAKTLL 116
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 35.1 bits (77), Expect = 0.031
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Frame = +1
Query: 145 PVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKA-LFRGLG---ITMARDSPAFAIY 312
P+E++K + Q+A R + A A + + + KA + R G + + RD P IY
Sbjct: 128 PMEMLKIQMQMAG---RHATTATANSSLVGSSSSTKAHISRSYGTASVAVPRDIPFSCIY 184
Query: 313 FVSYEA-------MTRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQV 444
F + M G ++ AG +AG + V + P+DV+K+RLQ+
Sbjct: 185 FPLFAYLNLKSIDMHGGKPPLIYCLGAGCLAGMTASVAVNPLDVIKTRLQL 235
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 130 SFACAPVELVKTRQQLAKPS--ERMPSGAWAGARYILKTGGYKALFRGLGITMARD 291
SF AP E VK Q+ K S + G + +TGG + +F+GLG TM R+
Sbjct: 175 SFIYAPTERVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLGPTMGRE 230
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 373 GGIAGALSWVLLYPIDVVKSRLQVDAV 453
G +AGA+S YP+DVV+ R+Q+ +
Sbjct: 168 GSLAGAVSQTATYPLDVVRRRMQMKGI 194
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 370 AGGIAGALSWVLLYPIDVVKSRLQVDAVG-TFSGAWDCLI 486
AGGIAGA+S + P++ VK LQ+ F G LI
Sbjct: 40 AGGIAGAVSRTSVSPLERVKILLQIQVKNPKFKGVLPTLI 79
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 142 APVELVKTRQQLAKPSERMPSGAWAGARYILKTGGYKALFRGLGITMARDSPAFAIYFVS 321
+P+E VK Q+ + + G I K G F+G G + R P A+ F +
Sbjct: 53 SPLERVKILLQIQVKNPKF-KGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAA 111
Query: 322 YEAMTRG 342
YE +G
Sbjct: 112 YEEYKKG 118
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.1 bits (67), Expect = 0.50
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 352 VMRVFTAGGIAGALSWVLLYPIDVVKSRLQV 444
V+ T G ++G +S ++ P D++K R+QV
Sbjct: 29 VIESLTCGALSGMISKAVILPFDIIKKRIQV 59
>SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 972
Score = 29.1 bits (62), Expect = 2.0
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Frame = -2
Query: 479 QSHAPENVPTASTC--SRDFTTSIGYRSTHDRAPAIPPAVNTRIT--DRSPLVIASYETK 312
Q +PE VP +T + + + G PA P+ + D PL++
Sbjct: 402 QYWSPEGVPLVATTLPTGEMVMTPGVLPVMATGPATMPSAGSPALGPDGQPLIVQQAYQS 461
Query: 311 *IAKAGLSRAIVMPKPRNKALYPPVFKMYLAPAHAPEGIRSLGFASC*RVLTSS 150
+ K+G + A V P P +L P H P+G+ G ++ +++ S
Sbjct: 462 MVVKSGSAHAGVQPHPSQGSLQP-------QGTHYPQGVAVSGASASGQMMMQS 508
>SB_8638| Best HMM Match : PP2C (HMM E-Value=6.5e-32)
Length = 905
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 78 GLADDSRNRWSSCRGTT 128
G+ +DSRNRWS C T
Sbjct: 635 GVDEDSRNRWSGCSAVT 651
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 370 AGGIAGALSWVLLYPIDVVKSRLQVDA-VGTFSG 468
+GG AGA+S +Y +D ++RL DA VG G
Sbjct: 119 SGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGG 152
>SB_47365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 21 NKRYGVWSLWEYSSSNA*PGLADDSRNRWSSCRGTT 128
NK+Y + Y ++ PG N+WSSCR T
Sbjct: 139 NKKYYMRCTTSYCYRDSCPGDTVFKSNKWSSCRSMT 174
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 21 NKRYGVWSLWEYSSSNA*PGLADDSRNRWSSCRGTT 128
NK+Y + Y ++ PG N+WSSCR T
Sbjct: 299 NKKYYMRCTTSYCYRDSCPGDTVFKSNKWSSCRHLT 334
>SB_56399| Best HMM Match : DUF23 (HMM E-Value=1.9e-28)
Length = 419
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 304 AIYFVSYEAMTRGD-RSVMRVFTAGGIAGALSWVL-LYPID 420
A +FV Y+ D + V+R + + G+A L+WV+ Y +D
Sbjct: 204 ADHFVFYDVAIPSDVKEVLRHYESKGVASVLTWVMPAYMLD 244
>SB_45633| Best HMM Match : DUF23 (HMM E-Value=3.2e-35)
Length = 334
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 304 AIYFVSYEAMTRGD-RSVMRVFTAGGIAGALSWVL-LYPID 420
A +FV Y+ D + V+R + + G+A L+WV+ Y +D
Sbjct: 119 ADHFVFYDVAIPSDVKEVLRHYESKGVASVLTWVMPAYMLD 159
>SB_45040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -1
Query: 228 VPGA--SPCAGRHTFTRFCELLTSFNQLDRCTRKAL*CPCNCSSGCVSRQRVRVRHCSTS 55
+PG PCAGR+ T CE L Q T L +C C R R R C+
Sbjct: 256 IPGVMGKPCAGRNVNTEKCE-LKPCPQDGGFTEWGL--FGDCDKSCGGGARTRKRECTNP 312
Query: 54 IP 49
P
Sbjct: 313 AP 314
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 338 LVIASYETK*IAKAGLSRAIVMPKPRNKALYPPVFKMYLAPAHAPEG 198
L+I +Y+ G +R ++ + N + PVF + AH PEG
Sbjct: 2471 LIIGAYDGSVPPHVGYARVVITLQDENDNV--PVFSQRVYTAHVPEG 2515
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 304 AIYFVSYEAMTRG--DRSVMRVFTAGGIAGALSWVLLYPIDVVKSRLQVD 447
A Y+ YE + D F +G I+G + ++ P DVVK+ Q++
Sbjct: 142 AFYWFGYEFVKSQTHDPGFGTHFLSGAISGLFAALITQPFDVVKTHRQIE 191
>SB_54977| Best HMM Match : MFS_1 (HMM E-Value=0.006)
Length = 698
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 298 AFAIYFVSYEAMTRGDRSVMRVFTAGGIAGALSWVLLYPIDVVKSRL 438
AFA Y ++ M + + +A A L++ YP+D++ RL
Sbjct: 321 AFAYYLITSPWMVLTVEILSGITSAASWAAMLAFTFPYPVDLISKRL 367
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 111 CSSGCVSRQRVRVRHCSTSIP 49
CSS C Q++R R+C+ IP
Sbjct: 393 CSSTCFIGQQLRTRNCTNPIP 413
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,802,381
Number of Sequences: 59808
Number of extensions: 323176
Number of successful extensions: 876
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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