Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G20
         (135 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43761| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.4  
SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.1  
SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)                   25   9.4  

>SB_43761| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 76  DGWTSTYDCVSHSLANFLQFLEGIP 2
           D W S Y+ + +SL   ++F+ G+P
Sbjct: 201 DQWQSVYEEIQNSLGCKIKFIPGLP 225


>SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 315

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 103 QSRGLGHCSDGWTSTYDCVSHSLANFLQFLEGIP 2
           Q R +G C   W   YD +   L   ++F +G+P
Sbjct: 40  QFRKIGFCYGQWQPAYDSMQRKLG--VEFHQGLP 71


>SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)
          Length = 485

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 82  CSDGWTSTYDCV 47
           C D W +TY CV
Sbjct: 409 CEDSWNNTYSCV 420


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,771,318
Number of Sequences: 59808
Number of extensions: 49639
Number of successful extensions: 125
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 16,821,457
effective HSP length: 25
effective length of database: 15,326,257
effective search space used: 291198883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)