Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G19
         (442 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   2.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   2.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   6.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.9  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 423 AIIWFLCYF 397
           A++W +CYF
Sbjct: 214 AVVWIMCYF 222


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 423 AIIWFLCYF 397
           A++W +CYF
Sbjct: 267 AVVWIMCYF 275


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 420 IIWFLCYF 397
           ++W LCYF
Sbjct: 182 LVWILCYF 189


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 160 LFLTCWLP 137
           +FL CWLP
Sbjct: 627 VFLICWLP 634


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,325
Number of Sequences: 438
Number of extensions: 3242
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)