Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G18
         (87 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   1.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   3.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    19   4.1  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 62  IGLIY*IYALEYYTKNGST 6
           IG++   + L++ TKNG++
Sbjct: 480 IGIVNQFHILQFITKNGTS 498


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
          protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 69 LPHWTDLL 46
          LP+WTDL+
Sbjct: 32 LPNWTDLV 39


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 32  EYYTKNGSTY 3
           E Y KNG TY
Sbjct: 164 EKYEKNGETY 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,790
Number of Sequences: 438
Number of extensions: 149
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 10
effective length of database: 141,963
effective search space used:  2555334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)