Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G17
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   4.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.5  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 252 ISPLPNPSGITGVSLCYVMLKFATLV 175
           + P PNPS    ++L Y++  F  L+
Sbjct: 39  VYPEPNPSLHYLLALLYILFTFLALL 64


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 375 WCFLLSIIPESGICSRY 325
           W FLL ++ +   C RY
Sbjct: 461 WEFLLKLLQDREYCPRY 477


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 167 IIKTSVANFNIT*HKLTPVIPEGLGRGEIANYTPHIPW 280
           I   S    +++ H ++PV    + RG + + T + PW
Sbjct: 249 IFGESAGGSSVSLHLISPVTRGLVRRGILQSGTLNAPW 286


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 167 IIKTSVANFNIT*HKLTPVIPEGLGRGEIANYTPHIPW 280
           I   S    +++ H ++PV    + RG + + T + PW
Sbjct: 249 IFGESAGGSSVSLHLISPVTRGLVRRGILQSGTLNAPW 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,756
Number of Sequences: 438
Number of extensions: 2494
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)