Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G10
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.8  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.8  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.8  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 516 ARYHAEDDEGTTSAGMPM 569
           ARYH   + G   AG+P+
Sbjct: 174 ARYHPYPNFGVPPAGIPL 191


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 352 IRRRLKDSEALRATLELPSDSCIDFVQTVDGLVFSST 462
           +RR     E  + TL   + + I+     DG+ +S+T
Sbjct: 88  LRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTT 124


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 352 IRRRLKDSEALRATLELPSDSCIDFVQTVDGLVFSST 462
           +RR     E  + TL   + + I+     DG+ +S+T
Sbjct: 88  LRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,550
Number of Sequences: 336
Number of extensions: 2416
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)