Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G10
         (592 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54784| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)                  28   5.0  
SB_48856| Best HMM Match : PQ-loop (HMM E-Value=9.4e-08)               28   6.6  
SB_37907| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)               27   8.7  
SB_21189| Best HMM Match : PCI (HMM E-Value=8.2)                       27   8.7  

>SB_54784| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 553

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +1

Query: 355 RRRLKDSEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIM 528
           R++L          EL ++SC    +     + + + YLKL    R  FL T+ H I+
Sbjct: 387 RQKLDSQRGAVLATELKNNSC-KLAKWTANSILAGSEYLKLGYVSRVNFLDTSKHTIL 443


>SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)
          Length = 900

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 376 EALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAH--AIMQKMTREQ 549
           E +R+  +LPS+SC   + +++    +   YL      R+  L T AH   ++ ++ R +
Sbjct: 475 ETIRSVKQLPSNSCTTVLTSIEEDYRARMPYLAYLTRSRQALLGTHAHLERLLDRVQRNK 534

Query: 550 LV 555
           L+
Sbjct: 535 LI 536


>SB_48856| Best HMM Match : PQ-loop (HMM E-Value=9.4e-08)
          Length = 235

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 566 GHSSTSCSLVIFCMIACAAVCRNCFLLPPSSFK*FVDEN 450
           G S+TSC+  +FC    A +   CF+L P   K F +++
Sbjct: 11  GVSATSCNFAVFCTYTDATLW--CFVLLPQIHKNFREKS 47


>SB_37907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 93

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -3

Query: 194 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQTKFYFECIHKVDNVLFIF 33
           E  ++ +R CQ N      A W   +RL +Q +I   K     I +++  L  F
Sbjct: 9   ETTESAVRRCQRNSVMDIDAAWPKFQRLKSQFSINSKKISMNDIKRLEAALIPF 62


>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
          Length = 1258

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 441 RSRIFVDELLETRRRQEKAVPADCSARYHAEDDE--GTTSAGMPMYIRGSI 587
           R  +F   L ETR  +++  PA  SAR   E++E   T++AG+    R S+
Sbjct: 409 RRHLFHVILKETRSGRQRRDPATRSAREKREEEEEKETSTAGLQRITRRSV 459


>SB_21189| Best HMM Match : PCI (HMM E-Value=8.2)
          Length = 125

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -3

Query: 194 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQTKFYFECIHKVDNVLFIF 33
           E  ++ +R CQ N      A W   +RL +Q +I   K     I +++  L  F
Sbjct: 41  ETTESAVRRCQRNSVMDIDAAWPKFQRLKSQFSINSKKISMNDIKRLEAALIPF 94


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,059,053
Number of Sequences: 59808
Number of extensions: 335303
Number of successful extensions: 778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)