Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_G10
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X92669-1|CAA63356.1| 309|Homo sapiens p35 protein. 32 1.7
X87843-1|CAA61112.1| 309|Homo sapiens cdk7/cyclin H assembly fa... 32 1.7
U61835-1|AAB05248.1| 267|Homo sapiens cyclin G1 interacting pro... 32 1.7
CR450336-1|CAG29332.1| 309|Homo sapiens MNAT1 protein. 32 1.7
BC000820-1|AAH00820.1| 309|Homo sapiens menage a trois homolog ... 32 1.7
AY165512-1|AAN47195.1| 309|Homo sapiens menage a trois 1 (CAK a... 32 1.7
Z19588-1|CAA79636.1| 387|Homo sapiens snoI protein. 30 7.0
X15219-1|CAA33289.1| 684|Homo sapiens protein ( Human sno oncog... 30 7.0
X15217-1|CAA33287.1| 415|Homo sapiens protein ( Human sno oncog... 30 7.0
U70730-1|AAB65850.1| 638|Homo sapiens SnoN2 protein. 30 7.0
BC059386-1|AAH59386.1| 684|Homo sapiens SKI-like oncogene protein. 30 7.0
>X92669-1|CAA63356.1| 309|Homo sapiens p35 protein.
Length = 309
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRK-QFLQTAAHAIMQ----KMTREQLVLE 561
DF++ V+ +VF+ TN + LD K+K + Q ++Q K+TREQ LE
Sbjct: 97 DFLEEVEEIVFNLTNNVDLDNTKKKMEIYQKENKDVIQKNKLKLTREQEELE 148
>X87843-1|CAA61112.1| 309|Homo sapiens cdk7/cyclin H assembly
factor protein.
Length = 309
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRK-QFLQTAAHAIMQ----KMTREQLVLE 561
DF++ V+ +VF+ TN + LD K+K + Q ++Q K+TREQ LE
Sbjct: 97 DFLEEVEEIVFNLTNNVDLDNTKKKMEIYQKENKDVIQKNKLKLTREQEELE 148
>U61835-1|AAB05248.1| 267|Homo sapiens cyclin G1 interacting
protein protein.
Length = 267
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRK-QFLQTAAHAIMQ----KMTREQLVLE 561
DF++ V+ +VF+ TN + LD K+K + Q ++Q K+TREQ LE
Sbjct: 97 DFLEEVEEIVFNLTNNVDLDNTKKKMEIYQKENKDVIQKNKLKLTREQEELE 148
>CR450336-1|CAG29332.1| 309|Homo sapiens MNAT1 protein.
Length = 309
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRK-QFLQTAAHAIMQ----KMTREQLVLE 561
DF++ V+ +VF+ TN + LD K+K + Q ++Q K+TREQ LE
Sbjct: 97 DFLEEVEEIVFNLTNNVDLDNTKKKMEIYQKENKDVIQKNKLKLTREQEELE 148
>BC000820-1|AAH00820.1| 309|Homo sapiens menage a trois homolog 1,
cyclin H assembly factor (Xenopus laevis) protein.
Length = 309
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRK-QFLQTAAHAIMQ----KMTREQLVLE 561
DF++ V+ +VF+ TN + LD K+K + Q ++Q K+TREQ LE
Sbjct: 97 DFLEEVEEIVFNLTNNVDLDNTKKKMEIYQKENKDVIQKNKLKLTREQEELE 148
>AY165512-1|AAN47195.1| 309|Homo sapiens menage a trois 1 (CAK
assembly factor) protein.
Length = 309
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRK-QFLQTAAHAIMQ----KMTREQLVLE 561
DF++ V+ +VF+ TN + LD K+K + Q ++Q K+TREQ LE
Sbjct: 97 DFLEEVEEIVFNLTNNVDLDNTKKKMEIYQKENKDVIQKNKLKLTREQEELE 148
>Z19588-1|CAA79636.1| 387|Homo sapiens snoI protein.
Length = 387
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 364 LKDSEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQKMTR 543
L + L L +PSDS + QTV L S + ++ GG+++ L ++++++ T
Sbjct: 112 LPSPQVLPGPLLIPSDSSTELTQTV--LEGESISCFQV-GGEKRLCLPQVLNSVLREFTL 168
Query: 544 EQLVLECPCTYV 579
+Q+ C Y+
Sbjct: 169 QQINTVCDELYI 180
>X15219-1|CAA33289.1| 684|Homo sapiens protein ( Human sno oncogene
mRNA for snoN protein, ski-related. ).
Length = 684
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 364 LKDSEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQKMTR 543
L + L L +PSDS + QTV L S + ++ GG+++ L ++++++ T
Sbjct: 124 LPSPQVLPGPLLIPSDSSTELTQTV--LEGESISCFQV-GGEKRLCLPQVLNSVLREFTL 180
Query: 544 EQLVLECPCTYV 579
+Q+ C Y+
Sbjct: 181 QQINTVCDELYI 192
>X15217-1|CAA33287.1| 415|Homo sapiens protein ( Human sno oncogene
mRNA for snoA protein, ski-related. ).
Length = 415
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 364 LKDSEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQKMTR 543
L + L L +PSDS + QTV L S + ++ GG+++ L ++++++ T
Sbjct: 124 LPSPQVLPGPLLIPSDSSTELTQTV--LEGESISCFQV-GGEKRLCLPQVLNSVLREFTL 180
Query: 544 EQLVLECPCTYV 579
+Q+ C Y+
Sbjct: 181 QQINTVCDELYI 192
>U70730-1|AAB65850.1| 638|Homo sapiens SnoN2 protein.
Length = 638
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 364 LKDSEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQKMTR 543
L + L L +PSDS + QTV L S + ++ GG+++ L ++++++ T
Sbjct: 124 LPSPQVLPGPLLIPSDSSTELTQTV--LEGESISCFQV-GGEKRLCLPQVLNSVLREFTL 180
Query: 544 EQLVLECPCTYV 579
+Q+ C Y+
Sbjct: 181 QQINTVCDELYI 192
>BC059386-1|AAH59386.1| 684|Homo sapiens SKI-like oncogene protein.
Length = 684
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 364 LKDSEALRATLELPSDSCIDFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQKMTR 543
L + L L +PSDS + QTV L S + ++ GG+++ L ++++++ T
Sbjct: 124 LPSPQVLPGPLLIPSDSSTELTQTV--LEGESISCFQV-GGEKRLCLPQVLNSVLREFTL 180
Query: 544 EQLVLECPCTYV 579
+Q+ C Y+
Sbjct: 181 QQINTVCDELYI 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,217,061
Number of Sequences: 237096
Number of extensions: 1442856
Number of successful extensions: 7492
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7492
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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