Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G10
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical p...    32   0.35 
Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z19155-4|CAA79560.3|  844|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z50797-3|CAC35828.1|  802|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z50797-2|CAA90672.1|  800|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46266-5|CAA86412.1|  375|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    27   10.0 

>U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical
           protein C33F10.2 protein.
          Length = 826

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 456 VDELLETRRRQEKAVPADCSARYHAEDDEGTT 551
           +DE+++  R  EK +P  C+ R HA   +GT+
Sbjct: 673 IDEIIKNSRGYEKLIPPSCTFRAHASPWKGTS 704


>Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical
           protein R07B5.8b protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 364 LKDSEALRATLELPSDSCIDFVQ-----TVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIM 528
           L++SEA + T       C+D+V      ++DG    S   ++ D  +RK   +T  H  M
Sbjct: 427 LRESEASKETKVQYDPECLDWVPRKMRPSMDGYHELSKEEIEQDEQRRKSIQKTPVHVSM 486

Query: 529 QKMT 540
           +K T
Sbjct: 487 EKAT 490


>Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical
           protein R07B5.8a protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 364 LKDSEALRATLELPSDSCIDFVQ-----TVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIM 528
           L++SEA + T       C+D+V      ++DG    S   ++ D  +RK   +T  H  M
Sbjct: 472 LRESEASKETKVQYDPECLDWVPRKMRPSMDGYHELSKEEIEQDEQRRKSIQKTPVHVSM 531

Query: 529 QKMT 540
           +K T
Sbjct: 532 EKAT 535


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 438 RRSRIFVDELLETRRRQEKAVPADCSARYHAEDDE 542
           RR RI+ DE LE     EK  PA  S++  A+DD+
Sbjct: 85  RRKRIYDDEYLEGGSDDEK--PASSSSKLAADDDD 117


>Z19155-4|CAA79560.3|  844|Caenorhabditis elegans Hypothetical
           protein F54G8.5 protein.
          Length = 844

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 590 RNGSTYVHGHSSTSCSLVIFCMIACAAV 507
           RNG   +     TS  LV+FCM AC+++
Sbjct: 259 RNGELLIPWMPWTSLVLVVFCMFACSSL 286


>Z72504-6|CAA96604.2|  906|Caenorhabditis elegans Hypothetical
           protein C29E6.4 protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 172 DTVKRTCLTAPARNGRSRSDFSLKTILDKPSFILSVSIKSI 50
           D  +  C+   AR    R +F +    D PSF +S+ +KSI
Sbjct: 166 DYYENNCVHPTARCPNGRIEFVVTRKADVPSFGISLGVKSI 206


>Z50797-3|CAC35828.1|  802|Caenorhabditis elegans Hypothetical
           protein T22H6.2b protein.
          Length = 802

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQK 534
           D +  V  L  +S N L L GGK  +    A HA++Q+
Sbjct: 479 DCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQE 516


>Z50797-2|CAA90672.1|  800|Caenorhabditis elegans Hypothetical
           protein T22H6.2a protein.
          Length = 800

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 421 DFVQTVDGLVFSSTNYLKLDGGKRKQFLQTAAHAIMQK 534
           D +  V  L  +S N L L GGK  +    A HA++Q+
Sbjct: 477 DCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQE 514


>Z46266-5|CAA86412.1|  375|Caenorhabditis elegans Hypothetical
           protein C07B5.5 protein.
          Length = 375

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 459 DELLETRRRQEKAVPADCSARYHAED 536
           D ++ET RR  + +P DC   YHA D
Sbjct: 279 DLVVETWRRGSE-IPLDCKLTYHAND 303


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
           protein Y47D3A.29 protein.
          Length = 1428

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 587 NGSTYVHGHSSTSCSLVIFCMIACAAVCRNCFLLP 483
           NG+ Y+ G   TS +    C I    +CR  + +P
Sbjct: 341 NGTVYLFGKVKTSGNAWETCSIVVKNICRKVYFMP 375


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,249,555
Number of Sequences: 27780
Number of extensions: 246766
Number of successful extensions: 661
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)