Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_G06
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   4.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.2  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.5  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.5  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.5  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.5  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.5  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.5  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.5  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.7  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 51  IYINEYFYFIKRITIFFLF 107
           ++ N +F+FI  IT+ FL+
Sbjct: 1   MFKNYHFFFILVITLIFLY 19


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 214 TIVDNKTVINKLNYSQTSRGSVNA 143
           TIVD   ++NK N ++    SVN+
Sbjct: 514 TIVDISKLVNKRNNAKIYTSSVNS 537


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 281 LLGFTLPPDSGEKLTLGVTILLSLTV 306


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 LKALTLPRDVCE*FNLFITVLLSTMV 215
           L   TLP D  E   L +T+LLS  V
Sbjct: 281 LLGFTLPPDSGEKLTLGVTILLSLTV 306


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 150 TLPRDVCE*FNLFITVLLSTMV 215
           TLP D  E  +L +T+LLS  V
Sbjct: 254 TLPPDSGEKLSLGVTILLSLTV 275


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 621 LSNDSSHFHKRQLSQNNMRVD 559
           LSN+  + ++  +S NN R +
Sbjct: 372 LSNNDVYLYQNTMSNNNQRTE 392


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 621 LSNDSSHFHKRQLSQNNMRVD 559
           LSN+  + ++  +S NN R +
Sbjct: 410 LSNNDVYLYQNTMSNNNQRTE 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,450
Number of Sequences: 438
Number of extensions: 3459
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)