Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_G04
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 166 1e-41
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 157 5e-39
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 139 2e-33
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 126 1e-29
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 99 3e-21
06_01_0229 - 1757998-1758241,1758318-1758388,1758467-1758586,175... 30 1.2
04_01_0488 - 6419731-6420843 29 2.2
07_01_0219 - 1627669-1629765 29 3.8
04_01_0477 - 6221990-6223224,6227722-6228817 29 3.8
01_05_0759 + 24963621-24963902,24963955-24964719 28 5.0
09_02_0529 + 10276063-10277439 28 6.6
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 28 6.6
11_04_0018 + 12301298-12301385,12302770-12302993,12303149-12303541 27 8.7
02_05_0713 + 31159574-31160764 27 8.7
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 27 8.7
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 166 bits (403), Expect = 1e-41
Identities = 84/163 (51%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Frame = +2
Query: 116 GIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTG-EEDRLAWDIHFWIGSKTSQDEAG 292
G+E+WRIE+F+PV VPT+ +G FY GDSYI+L TT + D+H+W+G TSQDEAG
Sbjct: 38 GLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAG 97
Query: 293 AAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGA 472
AAILTV L D G A+Q+RE+QG E+++ L YF+P I GG ASGFNHV +N
Sbjct: 98 TAAILTVEL-DAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQD 156
Query: 473 E-KRLFQIKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
RL+ +GK V VK+V SSLN D FILD ++I+ F
Sbjct: 157 HVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQF 199
Score = 62.5 bits (145), Expect = 2e-10
Identities = 42/172 (24%), Positives = 85/172 (49%), Gaps = 12/172 (6%)
Frame = +2
Query: 119 IEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFWIGSKTSQDEAGAA 298
+++WR+ + ++ Y+GD YI T +D+ I W G K+ +++ +A
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECLIGTWFGKKSVEEDRTSA 468
Query: 299 AILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQ--PAIRYLDGGHASGF-NHVTINAG 469
++L + FQ + Q + + YE K+ + +F +++ GG +SG+ N + +N
Sbjct: 469 ----ISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQSLQVFKGGLSSGYKNFIAVNGT 524
Query: 470 AEK-------RLFQIK--GKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
+ LF+I+ G N++ QV+ +SSLN C+IL + ++ +
Sbjct: 525 DDDTYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTW 576
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 157 bits (382), Expect = 5e-39
Identities = 81/163 (49%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 116 GIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTG-EEDRLAWDIHFWIGSKTSQDEAG 292
G+EIWRIE + V VP +G F++GDSY++L TT + DIH+W+G TSQDEAG
Sbjct: 77 GLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAG 136
Query: 293 AAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGA 472
AAI TV LD G A+Q+RE+QG E+++FL YF+P I +GG ASGF H IN
Sbjct: 137 TAAIKTVELD-AALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINERE 195
Query: 473 E-KRLFQIKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
RLF +GK V VK+V SSLN D FILD +I+ F
Sbjct: 196 HVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQF 238
Score = 64.1 bits (149), Expect = 8e-11
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Frame = +2
Query: 119 IEIWRIEDFEPVAVPTTHYGNFYSGDSYIV-LSTTGEEDRLAWDIHFWIGSKTSQDEAGA 295
+++WR+ E + + FYSGD YI S GEE I W G K+ QDE
Sbjct: 453 LQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECL-IGTWFGKKSVQDEK-T 510
Query: 296 AAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAE 475
AI + E + A+ R +G E +F FQ + + GG ++G+ G E
Sbjct: 511 TAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQNLVIF-KGGVSTGYKKFVSENGIE 569
Query: 476 K--------RLFQIKGK--RNVRVKQVEPRASSLNKGDCFILDVDHQIYVFV 601
LF+++G N++ QV+ A+SLN C++L ++ ++
Sbjct: 570 DDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTLFTWI 621
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 139 bits (336), Expect = 2e-33
Identities = 66/116 (56%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Frame = +2
Query: 116 GIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTG-EEDRLAWDIHFWIGSKTSQDEAG 292
G+EIWRIE+F+PV +P + YG F+ GDSYI+L TT + L DIH+WIG TSQDE+G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 293 AAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTI 460
AAILTV L D G A+Q+REIQG E+ +FL YF+P I GG ASGF HV +
Sbjct: 111 TAAILTVEL-DAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHVEV 165
Score = 68.9 bits (161), Expect = 3e-12
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Frame = +2
Query: 119 IEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFWIGSKT-SQDEAGA 295
+++WRI D + + +P+ FY+GD YI +D+ I W G K+ +D A
Sbjct: 405 LQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECLIGSWFGKKSIEEDRVTA 464
Query: 296 AAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAE 475
++ + ++ +FQ A+Q R +G E QF FQ + + GG +SG+ G +
Sbjct: 465 ISLASKMVESAKFQ--AVQTRLYEGKEPIQFFVIFQ-SFQVFKGGLSSGYKKFIAENGID 521
Query: 476 K--------RLFQIKGK--RNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
LF+I+G N++ QV+ ASSLN +IL + ++ +
Sbjct: 522 DDTYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHDGNTVFTW 572
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 126 bits (305), Expect = 1e-29
Identities = 67/119 (56%), Positives = 79/119 (66%)
Frame = +2
Query: 242 WDIHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYL 421
+DIHFWIG +SQDEAG AAI TV LD G A+QHRE+QGYES +FL YF+P I L
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDT-MLGGRAVQHRELQGYESDKFLSYFKPCIIPL 125
Query: 422 DGGHASGFNHVTINAGAEKRLFQIKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
+GG ASGF E RL+ KGKR +RVK+V SSLN D FILD + +IY F
Sbjct: 126 EGGFASGFK-TPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQF 183
Score = 66.9 bits (156), Expect(2) = 6e-12
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Frame = +2
Query: 77 EVHPAFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEED-RLAWDIH 253
EV P GK +E++ + A+P G FYSGD YIVL T D R + +
Sbjct: 389 EVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDKREEFYLT 445
Query: 254 FWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGH 433
+WIG K S E A T N +G I R QG E QF+ FQP + L GG
Sbjct: 446 YWIG-KDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQPMV-ILKGGI 503
Query: 434 ASGFNHVTINAGAEKR--------LFQIKGK--RNVRVKQVEPRASSLNKG 556
+SG+ G + LF+I G N +V QV+ R ++ G
Sbjct: 504 SSGYQKFVEEKGLKDETYSGDGIALFRISGTSIHNNKVLQVDARHDRVDLG 554
Score = 21.0 bits (42), Expect(2) = 6e-12
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = +2
Query: 536 ASSLNKGDCFILDVDHQIYVFV 601
+S+L+ DCF+L + ++ ++
Sbjct: 575 SSNLSPTDCFVLQSGNSMFTWI 596
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 98.7 bits (235), Expect = 3e-21
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Frame = +2
Query: 71 MPEVHPAFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRL-AWD 247
M V AF G K G++IW I +A+ + +G FY+G++YI+LST + + +
Sbjct: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
Query: 248 IHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDG 427
+H+W+G + +++ A+ + L D + +Q+RE QG ES +FL YF+P I + G
Sbjct: 61 VHYWVGEEAKEEDCLTASDKAIEL-DVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Query: 428 GHASGFNHVTINAGAEK--RLFQIKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
+S H+ I K +F+ +G+ RV +V SSL+ F++D + +I++F
Sbjct: 120 SLSS---HMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLF 175
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 119 IEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFWIG-SKTSQDEAGA 295
+++W +++ + T Y+GD YI+ + E+ + W G + ++D A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHLFFAWSGLNSINEDRVAA 461
Query: 296 AAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAE 475
A++++ +D +G A+ + +G E + F F+ I + GG + + +
Sbjct: 462 ASLMSGMID--SVKGHAVVAQVFEGREPEMFFLVFKSLIIF-KGGRSMAYKNFVSQRSDA 518
Query: 476 KRLFQIKGKRNVRVK 520
+Q G RV+
Sbjct: 519 NGWYQKNGVALFRVQ 533
>06_01_0229 -
1757998-1758241,1758318-1758388,1758467-1758586,
1758685-1758805,1759264-1759418,1759507-1759644,
1759688-1759801
Length = 320
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 230 DRLAWDIHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQ 352
D ++WD HF T +A+L +++D ++ GS+IQ
Sbjct: 155 DTISWDYHFEHAGNTPVTFTVKSAVLKESIEDLEWPGSSIQ 195
>04_01_0488 - 6419731-6420843
Length = 370
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 149 VRNPRSAIFQCRIFSRSSRRLDAPRAFLLS 60
VR P + +CR+ R+ RRL + R FLL+
Sbjct: 25 VRLPPKPLLRCRLVCRAWRRLTSTRGFLLA 54
>07_01_0219 - 1627669-1629765
Length = 698
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 379 RLVTLYLAVLDS-GSLELLVI*VHCQDGGRAGFVLARF-GADPKVD 248
+L+++YL VL G+ ELLV+ DGG FV + F GA+ +D
Sbjct: 12 KLISIYLLVLCVVGANELLVVAASGNDGGGGRFVYSGFAGANLTLD 57
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 149 VRNPRSAIFQCRIFSRSSRRLDAPRAFLLS 60
VR P + +CR+ R+ RRL + R FLL+
Sbjct: 29 VRLPPKPLLRCRLVCRAWRRLTSTRDFLLA 58
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 149 VRNPRSAIFQCRIFSRSSRRLDAPRAFLLS 60
VR P + +CR+ R+ RRL + R FLL+
Sbjct: 420 VRLPPKPLLRCRLVCRAWRRLTSTRDFLLA 449
>01_05_0759 + 24963621-24963902,24963955-24964719
Length = 348
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 235 TVLFTGCTKYYIGISRVEIAVMRGRDRNGFEILDPPYFNAAFFP 104
T F T + R + V GRD N F ++DP F+ P
Sbjct: 24 TAPFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLP 67
>09_02_0529 + 10276063-10277439
Length = 458
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 197 SYIVLSTTGEEDRLAWDIHFWIGSKTSQDEAGAAAILTVN 316
SY++ + EED I F IG T+++E A LTV+
Sbjct: 390 SYVLRALGVEEDMAHTSIRFGIGRFTTEEEVDRAIELTVH 429
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 341 SAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAG 469
SA+QHR K ++ Y +R +DGG AS + N+G
Sbjct: 62 SALQHRMEWRCNGKGYVAYRNFLLRRIDGGAASSCASTSSNSG 104
>11_04_0018 + 12301298-12301385,12302770-12302993,12303149-12303541
Length = 234
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 134 IEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLA 241
++DF ++VP Y D +IVL+T G D L+
Sbjct: 75 LKDFGLISVPDVTYRQITEKDEFIVLATDGVWDVLS 110
>02_05_0713 + 31159574-31160764
Length = 396
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -1
Query: 304 DGGRAGFVLARFGADPKVDVPG*TVLFTGCTKYYIGISRVEIAVMRGRDRNG 149
+G AG V G + G +Y +G S + +A+ GR++NG
Sbjct: 269 NGNAAGIVSREPGESSSSSLDTRRCFSMGTYQYVLGASELRVALQPGRNKNG 320
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/93 (22%), Positives = 44/93 (47%)
Frame = +2
Query: 263 GSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASG 442
G KT +D+A TV+ +EQ QGS + ++ + ++++ + A HA+
Sbjct: 348 GEKTPEDDATTREP-TVDTKEEQNQGSVEEMKDAEAVDTEETVQQSSVAFDEAIQDHAAT 406
Query: 443 FNHVTINAGAEKRLFQIKGKRNVRVKQVEPRAS 541
N + E + KG +V+ ++V +++
Sbjct: 407 TNPSSDIQSIEPE--ETKGPSDVKAEEVSSQSN 437
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,829,279
Number of Sequences: 37544
Number of extensions: 412245
Number of successful extensions: 1023
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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