Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_G04
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 136 2e-32
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 118 3e-27
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 2e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 56 2e-08
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 52 4e-07
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 47 1e-05
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 46 3e-05
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 46 3e-05
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 41 7e-04
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_34039| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_41233| Best HMM Match : RasGAP (HMM E-Value=0.029) 28 5.0
SB_55241| Best HMM Match : PH (HMM E-Value=6.1e-12) 28 5.0
SB_7857| Best HMM Match : GETHR (HMM E-Value=1.5) 28 6.6
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 27 8.8
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 136 bits (328), Expect = 2e-32
Identities = 78/175 (44%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Frame = +2
Query: 89 AFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGE--EDRLAWDIHFWI 262
A+ N+G + G++IWRIE F+ YG+FY GDSYI+L+T E ED L +D+HFWI
Sbjct: 468 AWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKESGEDELKYDVHFWI 527
Query: 263 GSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASG 442
G ++QDE G AA TV L D IQHRE+QG+ESK F YF+ ++ L GG SG
Sbjct: 528 GKDSTQDEYGTAAYKTVEL-DIHLNDKPIQHREVQGFESKLFKSYFK-SLTILKGGVDSG 585
Query: 443 FNHVTINAGAEKRLFQIKGK--RNVRVKQVEPRASSLNKGDCFILDVDHQIYVFV 601
F HV + RL +++G N V++V SSL D FILD +Y++V
Sbjct: 586 FRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKGLNLYLWV 639
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Frame = +2
Query: 173 YGNFYSGDSYIVLST--TGEEDRLAWDIHFWIGSKTSQDEAGAAAILTVNLD 322
YG FY GDSYI+L+T EED L +D+HFWIG ++QDE G AA TV LD
Sbjct: 885 YGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD 936
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 118 bits (285), Expect = 3e-27
Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Frame = +2
Query: 89 AFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEE---DRLAWDIHFW 259
A+ N+G+K G++IWRI F+ P YG FY+GDSYI+L T E+ ++L +D+HFW
Sbjct: 513 AWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWTYEEKEDTEKLCYDLHFW 572
Query: 260 IGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHAS 439
IG ++QDE G AA TV L D +QHREI +ES F YF+ +I YL GG +
Sbjct: 573 IGRGSTQDEYGTAAYKTVEL-DTYLNDVPVQHREIMNHESDMFKTYFK-SITYLKGGAET 630
Query: 440 GFNHVTINAGAEKRLFQIKGKRN 508
GFN V + R+ ++ G +N
Sbjct: 631 GFNQVKPKE-YKPRILKVSGDKN 652
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 66.5 bits (155), Expect = 2e-11
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 16/190 (8%)
Frame = +2
Query: 80 VHPAFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLS------TTGEEDRLA 241
V AF +G+K G+EIWRIE + VA YG FYSGDSYI LS + + D
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 242 WD----IHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSA----IQHREIQGYESKQFLDY 397
D I+ W GS+ S+ E + + DE+ G A I + +G ESK F D
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESK-FFDA 121
Query: 398 FQPAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRNVRVKQVEP-RASSLNKGDCFILD 574
+ + A + + G+ +R + +P + S+L+ DCFILD
Sbjct: 122 LGSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILD 181
Query: 575 VDHQ-IYVFV 601
++V+V
Sbjct: 182 CGSSGVFVWV 191
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 98 NSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLST-TGEEDRLAWDIHFWIGSKT 274
+ G+ + +R+ D V T G F+SGDSY+V+ T + + I+FW G+ +
Sbjct: 153 DDGRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDS 212
Query: 275 SQDEAGAAAILTVNLDDEQFQGSAIQ 352
E GAAA LTV+LD+ F G A+Q
Sbjct: 213 RVFEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 77 EVHPAFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLST 217
E PA+ +GK+ G+++WRI F+ P YG+FY+GDSYIVL+T
Sbjct: 356 EGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 356 REIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRNVRVKQVEPR 535
RE QG ES++F + F I Y++GG ASGF V RLF++ + V ++ V P
Sbjct: 284 REEQGDESEEFHELFDNDIAYIEGGTASGFYSVEDQIYI-TRLFRLLKDKRVLLEPVLPD 342
Query: 536 ASSLNKGDCFILDVDHQIYVF 598
SSL+ FILD +IY++
Sbjct: 343 VSSLDPTFTFILDAGLKIYIW 363
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 236 LAWDIHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQ 403
L ++HFW+GS+ S +E AA V L + +G +Q+RE +GYE+++F FQ
Sbjct: 19 LLHNLHFWVGSECSAEEYCTAAYKAVELF-VKLEGKPVQYREAEGYETEEFRKCFQ 73
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Frame = +2
Query: 92 FANSGKKC---GIEIWRIEDFEPVAVPTTHYGNFYSGDSYIV-LSTTGEEDRLAWD---- 247
F G C G+ +W I ++ +P ++G+F+SG+ Y++ + DR+A D
Sbjct: 209 FYKEGNLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSR 268
Query: 248 ------------IHFWIGSKTSQDEAGAAAILTVNLDDEQ 331
FW G+ + +E GAAA++ V LD+E+
Sbjct: 269 CRSTVAGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEER 308
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Frame = +2
Query: 92 FANSGKKC---GIEIWRIEDFEPVAVPTTHYGNFYSGDSYIV-LSTTGEEDRLAWD---- 247
F G C G+ +W I ++ +P ++G+F+SG+ Y++ + DR+A D
Sbjct: 1764 FYKEGNLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSR 1823
Query: 248 ------------IHFWIGSKTSQDEAGAAAILTVNLDDEQ 331
FW G+ + +E GAAA++ V LD+E+
Sbjct: 1824 CRSTVAGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEER 1863
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 497 GKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVFV 601
G+RN++ + +EP S N GDC++L +++ +V
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWV 1491
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 182 FYSGDSYIVLSTTGEEDRLAWDI-HFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHR 358
FY GDSY++L ++ + H G S DE AA + +DDE F G A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 359 EIQGYESKQF 388
++ E QF
Sbjct: 737 QVCCREKVQF 746
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 230 DRLAWDIHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPA 409
D++A+ FW G ++ +E GAAA++TV +D E+ +H ++ F Y + +
Sbjct: 191 DKVAY--FFWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECS 248
Query: 410 IRYLDGGHASG 442
+ GHA G
Sbjct: 249 CFFYCDGHALG 259
>SB_34039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 34.3 bits (75), Expect = 0.076
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 119 IEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEE---DRLAWDIHFWIGSKTSQDEA 289
+++W+I D E V G F S +YIV T E D + +IH W+ KT +
Sbjct: 53 VKVWQIHDGEMTVVE--RLGEFISNRAYIVFGTVKHEYSGDPIR-NIHIWVSKKTKSRDY 109
Query: 290 GAAAILTV 313
AA L +
Sbjct: 110 VAAMKLAM 117
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 350 QHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRNVRVK 520
Q R +Q E + FL F+ + L+GG +GF AG E+ + +GKR VK
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGF-----RAGCEEDTYDHEGKRMFHVK 89
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 230 DRLAWDIHFWIGSKTSQDEAGAAAILTVNLDDEQ 331
D++A+ FW G ++ +E GAAA++TV +D E+
Sbjct: 31 DKVAY--FFWQGHDSTVNEKGAAALMTVEIDSEK 62
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +2
Query: 140 DFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFWIGSKTSQDEAGAAAILTVNL 319
D PV + TH G+F + S + ++ D + + D+ +LTVN
Sbjct: 2299 DTSPVRITVTHPGSFGNTTSSLTITNLVRTDEARYSCK---AINAAGDKTSEQGLLTVNF 2355
Query: 320 DDEQFQGSAIQHRE 361
F+ SA Q RE
Sbjct: 2356 PPRIFKTSANQTRE 2369
>SB_41233| Best HMM Match : RasGAP (HMM E-Value=0.029)
Length = 118
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 46 RLYTKLNKNARGASSLRELREKMRH*NMADRGFRTRCGP 162
R+ N+ ARG SSLREL E + + + +R P
Sbjct: 61 RMVVHFNRGARGQSSLRELLEPLVNDVLNERNLNINTNP 99
>SB_55241| Best HMM Match : PH (HMM E-Value=6.1e-12)
Length = 734
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 212 STTGEEDRLAWDIHFWIGSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQ 385
S E D AW + + T +L N+ + +I+H + GY SKQ
Sbjct: 600 SAASEADMKAWMVALMQAASTVSKPGAGFQLLEGNVHNVSIPALSIRHPDCHGYLSKQ 657
>SB_7857| Best HMM Match : GETHR (HMM E-Value=1.5)
Length = 205
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 302 ILTVN-LDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAEK 478
+LT + LD F+ ++ + + E+ QF+ P + Y+ H+SG +
Sbjct: 94 LLTADVLDKLDFKQFSVSGKNM--LETVQFISII-PQVEYITALHSSGLGSLAERRDRLC 150
Query: 479 RLFQIKGKRNVRVKQVEPRASSLNKG 556
R F K + + + V PR +++ G
Sbjct: 151 RSFATKARTSPPLSHVFPRGDTISHG 176
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 467 GAEKRLFQIKGKRNVRVKQVEPRASSLNKGDC 562
GA++R+ + +G+R VR K A N+G C
Sbjct: 219 GAQRRIVRSRGRRWVRGKSPRCFAGEFNRGRC 250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,074,059
Number of Sequences: 59808
Number of extensions: 441954
Number of successful extensions: 956
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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