Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_G04
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 159 1e-39
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 79 3e-15
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 79 3e-15
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z68298-6|CAA92603.1| 109|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68298-4|CAA92601.1| 109|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68298-2|CAA92599.1| 109|Caenorhabditis elegans Hypothetical pr... 29 1.9
U21324-11|AAA62567.1| 109|Caenorhabditis elegans Hypothetical p... 29 1.9
AC084155-4|AAG23365.1| 410|Caenorhabditis elegans Hypothetical ... 29 3.3
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 4.4
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 4.4
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 5.9
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 5.9
U23516-5|AAG38885.1| 449|Caenorhabditis elegans Glycosylation r... 28 5.9
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 28 5.9
L17337-3|AAA28222.1| 331|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF332207-1|AAK17978.1| 378|Caenorhabditis elegans nuclear recep... 28 5.9
AF082010-1|AAD03022.1| 449|Caenorhabditis elegans UDP-N-acetylg... 28 5.9
AF016445-12|AAC69062.1| 374|Caenorhabditis elegans Nuclear horm... 28 5.9
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 159 bits (387), Expect = 1e-39
Identities = 83/173 (47%), Positives = 101/173 (58%), Gaps = 1/173 (0%)
Frame = +2
Query: 86 PAFANSGKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFWIG 265
PA A GKK G+ +WRI F VP +G FY GD+YI L + WD+HFW+G
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLG 64
Query: 266 SKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGF 445
S DE G AAI TV +DD G QHREIQ YES FL YF IRY+ GG+ SG+
Sbjct: 65 KNASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 446 NHVTIN-AGAEKRLFQIKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVFV 601
HV + LF KGKRNVR +VE +SLN GD FILD+ +YV++
Sbjct: 124 RHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWM 176
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 78.6 bits (185), Expect = 3e-15
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Frame = +2
Query: 104 GKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGE-EDRLAWDIHFWIGSKTSQ 280
G G+ +W IE+F P + +G FY D+Y+VL TT E +L I +W+G S
Sbjct: 505 GSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHASL 564
Query: 281 DEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHA-SGFNHVT 457
D+ +A+ V L + + RE E+++FL F I Y++GG SGF + T
Sbjct: 565 DKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YTT 622
Query: 458 INAGAEKRLFQ--IKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
RL++ + G V ++ V SL+ CF+LD I+++
Sbjct: 623 EKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIW 670
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 78.6 bits (185), Expect = 3e-15
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Frame = +2
Query: 104 GKKCGIEIWRIEDFEPVAVPTTHYGNFYSGDSYIVLSTTGE-EDRLAWDIHFWIGSKTSQ 280
G G+ +W IE+F P + +G FY D+Y+VL TT E +L I +W+G S
Sbjct: 505 GSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHASL 564
Query: 281 DEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHA-SGFNHVT 457
D+ +A+ V L + + RE E+++FL F I Y++GG SGF + T
Sbjct: 565 DKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YTT 622
Query: 458 INAGAEKRLFQ--IKGKRNVRVKQVEPRASSLNKGDCFILDVDHQIYVF 598
RL++ + G V ++ V SL+ CF+LD I+++
Sbjct: 623 EKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIW 670
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 374 ESKQFLDYFQPAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRNVRVKQVEPRASSLNK 553
E + L+ + AI + G + ++ + L Q++G +NV V+ V P SS+++
Sbjct: 185 EEPEKLETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQVRGSKNVDVRLVAPAMSSVHE 244
Query: 554 GDCFIL 571
CF++
Sbjct: 245 VACFVV 250
>Z68298-6|CAA92603.1| 109|Caenorhabditis elegans Hypothetical
protein F44D12.7 protein.
Length = 109
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 404 PAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRN 508
PA G AS H +NAGAEK +F+IK N
Sbjct: 8 PACTVPAAGGAS--THKLVNAGAEKMIFKIKSSNN 40
>Z68298-4|CAA92601.1| 109|Caenorhabditis elegans Hypothetical
protein F44D12.5 protein.
Length = 109
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 404 PAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRN 508
PA G AS H +NAGAEK +F+IK N
Sbjct: 8 PACTVPAAGGAS--THKLVNAGAEKMIFKIKSSNN 40
>Z68298-2|CAA92599.1| 109|Caenorhabditis elegans Hypothetical
protein F44D12.3 protein.
Length = 109
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 404 PAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRN 508
PA G AS H +NAGAEK +F+IK N
Sbjct: 8 PACTVPAAGGAS--THKLVNAGAEKMIFKIKSSNN 40
>U21324-11|AAA62567.1| 109|Caenorhabditis elegans Hypothetical
protein C35D10.11 protein.
Length = 109
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 404 PAIRYLDGGHASGFNHVTINAGAEKRLFQIKGKRN 508
PA G AS H +NAGAEK +F+IK N
Sbjct: 8 PACTVPAAGGAS--THKLVNAGAEKMIFKIKSSNN 40
>AC084155-4|AAG23365.1| 410|Caenorhabditis elegans Hypothetical
protein Y45G5AM.3 protein.
Length = 410
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 137 EDFEPVAVPTTHYGNFYSGDSY-IVLSTTGEEDRLAW 244
EDF+ V V + +F+SG + +V S G++ ++ W
Sbjct: 114 EDFDNVVVRVQFHHDFHSGKRFEVVFSQLGDDTQIRW 150
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 305 LTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGH-ASGFNHVTINAGAEKR 481
+T + D +Q ++ ++ YE D F IR DG H A HV +
Sbjct: 1710 VTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVAL-VDRNDH 1768
Query: 482 LFQIKGKRNVRVKQVEPRASSLNK 553
I G RV++ PR +S+ +
Sbjct: 1769 APHIHGATEHRVREDVPRGTSIGR 1792
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 305 LTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGH-ASGFNHVTINAGAEKR 481
+T + D +Q ++ ++ YE D F IR DG H A HV +
Sbjct: 1710 VTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVAL-VDRNDH 1768
Query: 482 LFQIKGKRNVRVKQVEPRASSLNK 553
I G RV++ PR +S+ +
Sbjct: 1769 APHIHGATEHRVREDVPRGTSIGR 1792
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 305 LTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGH-ASGFNHVTINAGAEKR 481
+T + D +Q ++ ++ YE D F IR DG H A HV +
Sbjct: 1710 VTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVAL-VDRNDH 1768
Query: 482 LFQIKGKRNVRVKQVEPRASSLNK 553
I G RV++ PR +S+ +
Sbjct: 1769 APHIHGATEHRVREDVPRGTSIGR 1792
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 305 LTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGH-ASGFNHVTINAGAEKR 481
+T + D +Q ++ ++ YE D F IR DG H A HV +
Sbjct: 1710 VTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVAL-VDRNDH 1768
Query: 482 LFQIKGKRNVRVKQVEPRASSLNK 553
I G RV++ PR +S+ +
Sbjct: 1769 APHIHGATEHRVREDVPRGTSIGR 1792
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 263 GSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQP 406
GS E G + + + +++EQ G+ +HR GYES + P
Sbjct: 526 GSLPRNFERGFSDLPPIEIENEQSFGAPPRHRSNLGYESTSMFNLSDP 573
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 263 GSKTSQDEAGAAAILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQP 406
GS E G + + + +++EQ G+ +HR GYES + P
Sbjct: 526 GSLPRNFERGFSDLPPIEIENEQSFGAPPRHRSNLGYESTSMFNLSDP 573
>U23516-5|AAG38885.1| 449|Caenorhabditis elegans Glycosylation
related protein 13 protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 137 EDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFW 259
E+ + A T + +F++G +++ S T E W + FW
Sbjct: 238 ENIDMTAASTLYRSDFFAGLGWMMSSKTWHELEPIWPVGFW 278
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 299 AILTVNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHASGFN-HVTINAGAE 475
AI V+L ++F HR GY L+ + +I+++DGG G HV + G +
Sbjct: 158 AIKNVDLPPDRFHNHV--HRGY-GYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQ 214
Query: 476 KRLFQ 490
FQ
Sbjct: 215 SVPFQ 219
>L17337-3|AAA28222.1| 331|Caenorhabditis elegans Hypothetical
protein ZK686.3 protein.
Length = 331
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 552 LFNEEALGSTCLTLTFLL--PLIWNKRFSAPAFMVT 451
LFN G CL +TF+ +WN P FM+T
Sbjct: 193 LFNRTVWGFVCLAITFIFMSGQMWN-HIRGPPFMIT 227
>AF332207-1|AAK17978.1| 378|Caenorhabditis elegans nuclear receptor
NHR-57 protein.
Length = 378
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 311 VNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHAS 439
V L E +GS Q +E+ G+E K YF + L+ G+ S
Sbjct: 173 VYLQFEFLEGSFPQFKEMGGFEKKHVFKYFFVSFLILEMGYRS 215
>AF082010-1|AAD03022.1| 449|Caenorhabditis elegans
UDP-N-acetylglucosamine:a-3-D-mannosideb-1,
2-N-acetylglucosaminyltransferase I protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 137 EDFEPVAVPTTHYGNFYSGDSYIVLSTTGEEDRLAWDIHFW 259
E+ + A T + +F++G +++ S T E W + FW
Sbjct: 238 ENIDMTAASTLYRSDFFAGLGWMMSSKTWHELEPIWPVGFW 278
>AF016445-12|AAC69062.1| 374|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 57 protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 311 VNLDDEQFQGSAIQHREIQGYESKQFLDYFQPAIRYLDGGHAS 439
V L E +GS Q +E+ G+E K YF + L+ G+ S
Sbjct: 169 VYLQFEFLEGSFPQFKEMGGFEKKHVFKYFFVSFLILEMGYRS 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,656,440
Number of Sequences: 27780
Number of extensions: 327887
Number of successful extensions: 774
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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