Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F24
(483 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 56 2e-08
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 52 3e-07
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 49 2e-06
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 48 4e-06
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 41 5e-04
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 29 1.6
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 29 1.6
At5g36870.1 68418.m04417 glycosyl transferase family 48 protein ... 29 1.6
At3g19810.1 68416.m02509 expressed protein contains Pfam PF02620... 27 6.6
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 27 6.6
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 27 6.6
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 27 6.6
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 27 6.6
At5g59750.1 68418.m07489 riboflavin biosynthesis protein, putati... 27 8.8
At5g26010.1 68418.m03095 protein phosphatase 2C, putative / PP2C... 27 8.8
At3g27500.1 68416.m03438 DC1 domain-containing protein contains ... 27 8.8
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +2
Query: 296 CKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLM 475
C+ +++ QI E + S Y AM A+F RD I G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 476 RG 481
RG
Sbjct: 157 RG 158
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 284 MHNP-CKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLI 460
+++P C+ +++ QI E + S Y A+ A+F RD + G AK F +++ EEREHA L+
Sbjct: 90 LYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLM 149
Query: 461 DYLLMRG 481
+Y RG
Sbjct: 150 EYQNKRG 156
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +2
Query: 299 KDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMR 478
+ +++ QI E + S Y A+ A+F RD + GFAK F D++ EER HA ++Y R
Sbjct: 90 ESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKR 149
Query: 479 G 481
G
Sbjct: 150 G 150
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 308 MHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRG 481
++ QI E + S Y +M A+F RD + G AK F +++ EER HA K ++Y RG
Sbjct: 98 INEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 320 IQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 466
I E + S Y A+ A+ RD + GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 203 GTLAVSTPAIAIQCHVNPANVSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGA 367
G+LA A C P NVS E M P +HA + EV L MGA
Sbjct: 136 GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGA 190
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 203 GTLAVSTPAIAIQCHVNPANVSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGA 367
G+LA A C P NVS E M P +HA + EV L MGA
Sbjct: 136 GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGA 190
>At5g36870.1 68418.m04417 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1862
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 391 IDHVTGEMGTHCQILYGRVHLSLYLRVHAVFTRIVHC 281
+D+ +GT Q+L+ + +SL+L A+F ++ C
Sbjct: 1720 LDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTC 1756
>At3g19810.1 68416.m02509 expressed protein contains Pfam PF02620:
Uncharacterized ACR, COG1399
Length = 321
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 6 IKAIDVNSQCLFVILLSIVQVAFCTSVCKG 95
+K ID++ ++ L I A C S CKG
Sbjct: 249 VKEIDISKHIRDLVHLEITITAICDSACKG 278
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 369 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 253
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 369 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 253
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 369 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 253
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 369 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 253
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At5g59750.1 68418.m07489 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 509
Score = 26.6 bits (56), Expect = 8.8
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 441 SLSSLAASKNSFANPGRLITSREKWAPIARYC--TDASTSVCICACMLSLQGLCIVTHSE 268
+LSSL A + F PG + + + + R T+AS + I A + L L + E
Sbjct: 210 ALSSLDAKPDDFRRPGHVFPLKYRDGGVLRRAGHTEASVDLMILAGLRPLSVLSAILDQE 269
Query: 267 D 265
D
Sbjct: 270 D 270
>At5g26010.1 68418.m03095 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase-2C, Mesembryanthemum
crystallinum, AF075579
Length = 337
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 380 HGRNGHPLPDIVRTRPPQFVFA 315
HG+NGH + +VR R P + A
Sbjct: 80 HGKNGHMVSKMVRNRLPSVLLA 101
>At3g27500.1 68416.m03438 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 609
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 193 CNRRYPGCLYACYRYTMSREPSKCILRMGDNAQ 291
CN Y G Y CYR + R KC++ + + Q
Sbjct: 144 CNENYEGQGYLCYRCGL-RIHEKCVVELQEITQ 175
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,309,599
Number of Sequences: 28952
Number of extensions: 207700
Number of successful extensions: 516
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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