Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F23
(391 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1450.04 |tef5||translation elongation factor EF-1 beta subun... 132 2e-32
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 29 0.34
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 25 4.1
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 25 5.5
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 24 7.2
SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyce... 24 7.2
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 24 7.2
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 24 7.2
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 24 7.2
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 24 7.2
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 24 9.5
SPAC13G6.15c ||SPAC24B11.04c|calcipressin|Schizosaccharomyces po... 24 9.5
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 24 9.5
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 24 9.5
>SPCC1450.04 |tef5||translation elongation factor EF-1 beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 214
Score = 132 bits (318), Expect = 2e-32
Identities = 58/100 (58%), Positives = 76/100 (76%)
Frame = +2
Query: 71 YADKKSKKPALIAKSSIILDVKPWDDETDMKEMENQVRTIEMDGLLWGASKLVPVGYGIN 250
Y KK+ KP + KS + LDVKPWDDET M E+E VR+I+MDGL+WG SKLVPVG+G+N
Sbjct: 115 YNKKKAAKPKAVHKSLVTLDVKPWDDETPMDELEKAVRSIQMDGLVWGLSKLVPVGFGVN 174
Query: 251 KLQIMCVIEDDKVSVDLLTDHIQDIEDFVQSVDIAAFNTI 370
K QI V+EDDKVS++ L + ++ ED+VQS DIAA + +
Sbjct: 175 KFQINLVVEDDKVSLEALQEELEGFEDYVQSTDIAAMSKL 214
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 28.7 bits (61), Expect = 0.34
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -3
Query: 197 PFQLCALGFPFLSYLSHHPMVL--HQGL*RTLQ 105
P+QL L + +L + +HHP +L GL +T+Q
Sbjct: 558 PYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQ 590
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 25.0 bits (52), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 77 DKKSKKPALIAKSSIILDVKPWDDETDMKEME 172
DK+S P LIA++ + ++ D+ +KE E
Sbjct: 692 DKESNSPVLIAETRLFNNLFKCDNPAALKEQE 723
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 24.6 bits (51), Expect = 5.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 305 TDHIQDIEDFVQSVDI 352
TDH+Q DF+Q V I
Sbjct: 90 TDHVQAARDFIQDVGI 105
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 24.2 bits (50), Expect = 7.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 370 DCIKGSNVYRLYEIFDVLNVVSKKVY*YFVIF 275
+CIK Y +YEI D L Y FVI+
Sbjct: 157 ECIKYRQFYSVYEIIDFLRT---NFYRLFVIY 185
>SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 214
Score = 24.2 bits (50), Expect = 7.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 209 IEGHPFQLCALGFPFLSYLSHHPMVLHQ 126
I+ HP L L P YL H ++H+
Sbjct: 104 IQSHPNLLLYLSSPERQYLLRHQQIVHR 131
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 24.2 bits (50), Expect = 7.2
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +2
Query: 65 KAYADKKSKKPALIAKSSIILDVKPWDDETDMKEMENQVRTIEMDGLLWG 214
KA + ++ + + + ++ W++E + E QVR + + L WG
Sbjct: 298 KAETEGTNEPETSVQIDPLNVSMENWENEMKNLDCETQVRQLALYLLCWG 347
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 24.2 bits (50), Expect = 7.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 370 DCIKGSNVYRLYEIFDVLNVVSKKVY*YFVIF 275
+CIK Y +YEI D L Y FVI+
Sbjct: 157 ECIKYRQFYSVYEIIDFLRT---NFYRLFVIY 185
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 24.2 bits (50), Expect = 7.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 370 DCIKGSNVYRLYEIFDVLNVVSKKVY*YFVIF 275
+CIK Y +YEI D L Y FVI+
Sbjct: 129 ECIKYRQFYSVYEIIDFLRT---NFYRLFVIY 157
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 24.2 bits (50), Expect = 7.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 370 DCIKGSNVYRLYEIFDVLNVVSKKVY*YFVIF 275
+CIK Y +YEI D L Y FVI+
Sbjct: 157 ECIKYRQFYSVYEIIDFLRT---NFYRLFVIY 185
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 23.8 bits (49), Expect = 9.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 80 KKSKKPALIAKSSIILDVKPWDDETDMKEMENQV 181
+KSK P ++ LDV PWD + K++ Q+
Sbjct: 858 EKSKNPIILHVVLQALDVFPWDLLGEHKKIIQQL 891
>SPAC13G6.15c ||SPAC24B11.04c|calcipressin|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 163
Score = 23.8 bits (49), Expect = 9.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 308 DHIQDIEDFVQSVDIAAFNTI 370
DH+ ++ +FVQ ++ AF +
Sbjct: 9 DHVDELNEFVQQLNPVAFTRV 29
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 23.8 bits (49), Expect = 9.5
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +2
Query: 104 IAKSSIILDVKPWDDETDMKEMENQVRTIEMDGLLWGASKL 226
+AK L++ W + +D+++ + + T+ DG + A+ L
Sbjct: 103 VAKKFSYLNLYTWTEISDLEQKVDAIITVGGDGTILHAASL 143
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 23.8 bits (49), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 286 FVIFNDTHNLKFVDAIANRDKL 221
F F D HNL FV ++A +L
Sbjct: 164 FYTFQDAHNLYFVLSLARNGEL 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,448,077
Number of Sequences: 5004
Number of extensions: 26480
Number of successful extensions: 66
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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