Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F23
         (391 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   150   4e-37
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   144   1e-35
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical pr...    28   2.0  
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    28   2.0  
Z78541-3|CAD44120.1|  733|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z70269-4|CAA94223.2|  733|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z70269-1|CAD44161.1|  770|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81130-3|CAB03415.1|  240|Caenorhabditis elegans Hypothetical pr...    26   8.2  
AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical ...    26   8.2  
AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical ...    26   8.2  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  150 bits (363), Expect = 4e-37
 Identities = 77/124 (62%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   LFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSIILDVKPWDDETDMKEMENQV 181
           LFGS                L AYA+KK+KK   IAKSS+ILDVKPWDDETD+ EME  V
Sbjct: 90  LFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLV 149

Query: 182 RTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTDHIQ-DIEDFVQSVDIAA 358
           R+IEMDGL+WG +KL+P+GYGI KLQI+ VIED KVSVD L + I  D ED VQSVDI A
Sbjct: 150 RSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVA 209

Query: 359 FNTI 370
           FN I
Sbjct: 210 FNKI 213


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  144 bits (350), Expect = 1e-35
 Identities = 76/124 (61%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   LFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSIILDVKPWDDETDMKEMENQV 181
           LFGS                L AYA KK+ K   IAKSS+ILDVKPWDDETD+ EME  V
Sbjct: 140 LFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKLV 199

Query: 182 RTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTDHIQ-DIEDFVQSVDIAA 358
           R+IEMDGL+WG +KL+P+GYGI KLQI+ VIED KVSVD L + I  D ED VQSVDI A
Sbjct: 200 RSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVA 259

Query: 359 FNTI 370
           FN I
Sbjct: 260 FNKI 263


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +2

Query: 191 EMDGLLWGASKLVPVGYGINKLQIMC----VIEDDKVSVDLLTDHIQDIEDFV-QSVDIA 355
           E +  L G+  LVPV    N+LQI+C       DD V +   T    +I D + +S++  
Sbjct: 14  EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIRKSLEEI 73

Query: 356 AFNT 367
            F T
Sbjct: 74  DFET 77


>Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical
           protein F34D10.3 protein.
          Length = 147

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 112 LCNKSGFLRLFVSICLKTFFTDSGCFCILF 23
           L N SG  + ++ +CL  F TD+ CF +LF
Sbjct: 27  LDNSSGD-KQYIFLCLIVFATDAACFGVLF 55


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 116 SIILDVKPWDDETDMKEMENQVRTIEMDGLLWGASKLVPVGY 241
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471


>Z78541-3|CAD44120.1|  733|Caenorhabditis elegans Hypothetical
           protein ZK1086.1a protein.
          Length = 733

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 128 DVKPWDDETDMKEMENQ--VRTI 190
           D +PWD+  D++++EN   V+TI
Sbjct: 601 DYRPWDNNNDIQQIENNYVVKTI 623


>Z70269-4|CAA94223.2|  733|Caenorhabditis elegans Hypothetical
           protein ZK1086.1a protein.
          Length = 733

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 128 DVKPWDDETDMKEMENQ--VRTI 190
           D +PWD+  D++++EN   V+TI
Sbjct: 601 DYRPWDNNNDIQQIENNYVVKTI 623


>Z70269-1|CAD44161.1|  770|Caenorhabditis elegans Hypothetical
           protein ZK1086.1b protein.
          Length = 770

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 128 DVKPWDDETDMKEMENQ--VRTI 190
           D +PWD+  D++++EN   V+TI
Sbjct: 638 DYRPWDNNNDIQQIENNYVVKTI 660


>Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical
           protein C33A12.11 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
 Frame = -1

Query: 199 IHFNCAHLVF-----HFFHICLIIPWFYI 128
           +HFN +++ F     HF     IIPWFY+
Sbjct: 11  VHFNQSYIDFQYNWNHFSTYLAIIPWFYM 39


>Z81130-3|CAB03415.1|  240|Caenorhabditis elegans Hypothetical
           protein T23G11.4 protein.
          Length = 240

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 248 NKLQIMCVIEDDKVSVDLLTDHIQDIEDFVQS 343
           +K+Q   ++EDD V+ D  +  + DI D  +S
Sbjct: 10  SKIQKRKILEDDDVAADEESSRVSDIRDLQRS 41


>AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical
           protein C16A11.5 protein.
          Length = 643

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +2

Query: 62  LKAYADKKSKKPALIAKSSIILDVKPWDDETDMKEMENQVR 184
           LK   +K++K    +++    LDV+   +E ++KEME+ +R
Sbjct: 454 LKTSQNKENKMRKKVSELEKKLDVENVQNEQEVKEMEDDLR 494


>AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical
           protein F48A11.4 protein.
          Length = 382

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 197 DGLLWGASKLVPVGYGINKLQIMCVIE---DDKVSVDLLTDHIQDIEDFVQSVDI 352
           +G+L  A+K + + +     +++ + E   DD++ V L  +H+Q   DF+  V I
Sbjct: 172 NGIL-DANKFLQLPFAARLRKLLILYESSFDDRLLVQLTAEHLQLASDFITDVGI 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,069,624
Number of Sequences: 27780
Number of extensions: 152956
Number of successful extensions: 502
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)