Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F22
(260 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil... 31 0.14
At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac... 29 0.42
At5g46260.1 68418.m05695 disease resistance protein (TIR-NBS-LRR... 27 1.3
At5g12480.1 68418.m01466 calmodulin-domain protein kinase isofor... 27 1.7
At5g19450.2 68418.m02318 calcium-dependent protein kinase 19 (CD... 27 2.3
At5g19450.1 68418.m02317 calcium-dependent protein kinase 19 (CD... 27 2.3
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 26 3.9
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 26 3.9
At3g13220.1 68416.m01654 ABC transporter family protein contains... 26 3.9
At4g11230.1 68417.m01819 respiratory burst oxidase, putative / N... 25 5.2
At4g04370.1 68417.m00624 pentatricopeptide (PPR) repeat-containi... 25 5.2
At3g10190.1 68416.m01220 calmodulin, putative similar to calmodu... 25 5.2
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 25 5.2
At1g54130.1 68414.m06171 RelA/SpoT protein, putative (RSH3) iden... 25 5.2
At3g26090.1 68416.m03249 expressed protein 25 6.9
At5g67540.2 68418.m08516 glycosyl hydrolase family protein 43 co... 25 9.1
At5g67540.1 68418.m08517 glycosyl hydrolase family protein 43 co... 25 9.1
At3g49880.1 68416.m05453 glycosyl hydrolase family protein 43 co... 25 9.1
At2g06904.1 68415.m00778 hypothetical protein 25 9.1
At1g70100.3 68414.m08067 expressed protein 25 9.1
At1g70100.2 68414.m08066 expressed protein 25 9.1
At1g70100.1 68414.m08065 expressed protein 25 9.1
At1g61750.1 68414.m06964 expressed protein contains Pfam profile... 25 9.1
>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase [Arabidopsis thaliana]
GI:3044214
Length = 664
Score = 30.7 bits (66), Expect = 0.14
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 217 SISERDIEQLQRWYEDLLTKLRPNAVGLVDSFDIRDE 107
S++ + L +++RPNAV LVD+FD D+
Sbjct: 576 SVTPEQASLANQQLRSLYSQVRPNAVALVDAFDYTDQ 612
>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
Length = 675
Score = 29.1 bits (62), Expect = 0.42
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 169 LLTKLRPNAVGLVDSFDIRD 110
L T++RPNAV LVD+F+ D
Sbjct: 592 LYTQVRPNAVALVDAFNYTD 611
>At5g46260.1 68418.m05695 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1205
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 66 KNIHDIHKKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSDIDVN 224
+N++ + K NM F +S T PT F L +++ + +CS + D N
Sbjct: 672 QNLNKLLKLNMAFCNSL----ETLPTGFNLKSLNRIDFTKCSKLRTFPDFSTN 720
>At5g12480.1 68418.m01466 calmodulin-domain protein kinase isoform 7
(CPK7) identical to calmodulin-domain protein kinase
CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 535
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 202 DIEQLQRWYEDLLTKLR-PNAVGLVDSFDIRDEVNTMFFLC 83
DIE ++R E + + PN V L DSF+ D V+ + LC
Sbjct: 100 DIEDVRREVEIMKHMPKHPNVVSLKDSFEDDDAVHIVMELC 140
>At5g19450.2 68418.m02318 calcium-dependent protein kinase 19
(CDPK19) identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|836942|gb|AAA67655
Length = 533
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 202 DIEQLQRWYEDLLTKLR-PNAVGLVDSFDIRDEVNTMFFLC 83
DIE ++R E + R PN V L D+F+ D V+ + LC
Sbjct: 98 DIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIVMELC 138
>At5g19450.1 68418.m02317 calcium-dependent protein kinase 19
(CDPK19) identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|836942|gb|AAA67655
Length = 533
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 202 DIEQLQRWYEDLLTKLR-PNAVGLVDSFDIRDEVNTMFFLC 83
DIE ++R E + R PN V L D+F+ D V+ + LC
Sbjct: 98 DIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIVMELC 138
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related contains
weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 87 KKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSDIDVNC 227
K+ +V+T+ + + P A +SLV+ S+Y+ + + +R + C
Sbjct: 1334 KRRLVYTTQLMQQLCSPPPARVISLVASSNYEFVAYTAARGALGDAC 1380
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 139 GLVDSFDIRDEVNTMFFLCMS 77
GLV FD+R E T F C S
Sbjct: 171 GLVQRFDLRTEAPTELFTCRS 191
>At3g13220.1 68416.m01654 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to white
protein GB:Q27256 [Anopheles gambiae]
Length = 685
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 11/62 (17%)
Frame = -2
Query: 226 QFTSISERDIEQLQRWYEDLLTKLRPNAVGLV-----------DSFDIRDEVNTMFFLCM 80
QF +S R + +R Y D L ++ V +V +RD+V MF++C+
Sbjct: 415 QFLILSRRTFRERRRDYFDKLRLVQSLGVAVVLGLLWWKSKTDTEAHLRDQVGLMFYICI 474
Query: 79 SW 74
W
Sbjct: 475 FW 476
>At4g11230.1 68417.m01819 respiratory burst oxidase, putative /
NADPH oxidase, putative similar to respiratory burst
oxidase homolog F [gi:3242456], RbohAp108 [gi:2654868]
from Arabidopsis thaliana, respiratory burst oxidase
homolog [GI:16549087] from Solanum tuberosum; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 941
Score = 25.4 bits (53), Expect = 5.2
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -2
Query: 106 VNTMFFLCMSWIFLW 62
V T++F+ M+W+F+W
Sbjct: 377 VLTLWFVIMAWLFMW 391
>At4g04370.1 68417.m00624 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 729
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 57 INHKNIHDIHKKNMVFTSSRISNESTSPT-AFGLSLVSKSSYQRCSCSMS 203
INH + H HK+ + SS ++N+ T F L + +S QR S +S
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
>At3g10190.1 68416.m01220 calmodulin, putative similar to calmodulin
NtCaM13 [Nicotiana tabacum] GI:14625425, calmodulin
GB:AAA34015 [Glycine max]; contains INTERPRO:IPR002048
calcium-binding EF-hand domain
Length = 209
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 90 KNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCS 197
K S S S SPTAF S SS Q C S
Sbjct: 9 KRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNS 44
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 117 ISNESTSPTAFGLSLVSKS--SYQRCSCSMSRSDIDVNCH 230
++++ TS F + SK+ Y++ C + + ID+NCH
Sbjct: 201 MASDRTSKVLFSMPKRSKAVRQYKQADCELVK--IDINCH 238
>At1g54130.1 68414.m06171 RelA/SpoT protein, putative (RSH3)
identical to RSH3 (RelA/SpoT homolog) GI:7141308 from
[Arabidopsis thaliana]; contains Pfam profiles PF01966:
HD domain, PF04607: Region found in RelA / SpoT proteins
Length = 712
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 108 SSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRS 209
SS S+ ++SPT GLSL+ + + S S S S
Sbjct: 38 SSSASSSTSSPTIGGLSLLFSGASVKSSSSSSSS 71
>At3g26090.1 68416.m03249 expressed protein
Length = 459
Score = 25.0 bits (52), Expect = 6.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 81 IHKKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCS 191
+HK+ F+S R+S+ S F +SKSS RCS
Sbjct: 422 MHKEGYSFSSPRLSSVQGSDDPFYQEHMSKSS--RCS 456
>At5g67540.2 68418.m08516 glycosyl hydrolase family protein 43
contains similarity to xylanase GI:2645416 from
[Caldicellulosiruptor saccharolyticus]
Length = 471
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 75 HDIHKKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSD 212
HD+HK N++ I NE T + + ++Y + S ++ S+
Sbjct: 228 HDLHKSNVLERPKVIYNEKTEKYVMWMH-IDDANYTKASVGVAISN 272
>At5g67540.1 68418.m08517 glycosyl hydrolase family protein 43
contains similarity to xylanase GI:2645416 from
[Caldicellulosiruptor saccharolyticus]
Length = 466
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 75 HDIHKKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSD 212
HD+HK N++ I NE T + + ++Y + S ++ S+
Sbjct: 223 HDLHKSNVLERPKVIYNEKTEKYVMWMH-IDDANYTKASVGVAISN 267
>At3g49880.1 68416.m05453 glycosyl hydrolase family protein 43
contains similarity to xylanase GI:2645416 from
[Caldicellulosiruptor saccharolyticus]
Length = 466
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 75 HDIHKKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSD 212
HD+HK N++ I N T + + ++Y + S ++ SD
Sbjct: 215 HDLHKSNVLERPKVIYNSDTGKYVMWMH-IDDANYTKASVGVAISD 259
>At2g06904.1 68415.m00778 hypothetical protein
Length = 217
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 57 INHKNIHDIHKKNMVFTSSRISNESTSPTAFGLSLVSKSSYQ 182
+ K + H+ MV +S++S++ +F LSL S SY+
Sbjct: 71 VEQKLASEGHEIVMVHDYVSVSSKSSASPSFALSLYSPISYE 112
>At1g70100.3 68414.m08067 expressed protein
Length = 504
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 87 KKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSDI 215
+K+M +++ ++ P F VSKS+ S S SRS +
Sbjct: 277 EKSMTKATNKAASPVLKPPGFSTPRVSKSASTISSMSTSRSSV 319
>At1g70100.2 68414.m08066 expressed protein
Length = 482
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 87 KKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSDI 215
+K+M +++ ++ P F VSKS+ S S SRS +
Sbjct: 277 EKSMTKATNKAASPVLKPPGFSTPRVSKSASTISSMSTSRSSV 319
>At1g70100.1 68414.m08065 expressed protein
Length = 467
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 87 KKNMVFTSSRISNESTSPTAFGLSLVSKSSYQRCSCSMSRSDI 215
+K+M +++ ++ P F VSKS+ S S SRS +
Sbjct: 277 EKSMTKATNKAASPVLKPPGFSTPRVSKSASTISSMSTSRSSV 319
>At1g61750.1 68414.m06964 expressed protein contains Pfam profile:
PF01657 domain of unknown function
Length = 352
Score = 24.6 bits (51), Expect = 9.1
Identities = 7/27 (25%), Positives = 17/27 (62%)
Frame = -1
Query: 101 YHVFFMYVMDIFMVYLIM*LHCILIMT 21
YH+FF+ + +++Y+ ++ L+ T
Sbjct: 302 YHIFFLINIKTYLIYITWIIYLFLLST 328
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,335,577
Number of Sequences: 28952
Number of extensions: 91359
Number of successful extensions: 293
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,070,560
effective HSP length: 65
effective length of database: 10,188,680
effective search space used: 213962280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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