Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F19
(405 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 190 9e-48
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 173 1e-42
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 172 3e-42
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 171 6e-42
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 161 4e-39
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 157 1e-37
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 109 3e-23
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 108 5e-23
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 107 1e-22
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 105 4e-22
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 103 1e-21
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 95 4e-19
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 95 5e-19
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 94 1e-18
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 92 4e-18
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 73 2e-12
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 2e-10
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 4e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.004
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut... 41 0.008
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 40 0.019
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.025
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 39 0.033
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 38 0.10
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 38 0.10
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.18
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.31
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 35 0.54
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 0.94
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 1.2
UniRef50_Q3S2A0 Cluster: Ribosomal protein S8; n=1; Thalassiosir... 33 1.6
UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Re... 33 1.6
UniRef50_Q7QWF3 Cluster: GLP_336_20608_17336; n=1; Giardia lambl... 33 1.6
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 2.2
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 33 2.2
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 2.9
UniRef50_O21254 Cluster: Ribosomal protein S8; n=1; Reclinomonas... 32 3.8
UniRef50_Q8F5E7 Cluster: Virulence factor mviN; n=4; Leptospira|... 32 5.0
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 5.0
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 32 5.0
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 5.0
UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocyst... 31 6.6
UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165; Bacter... 31 6.6
UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8; Chlorobi... 31 6.6
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri... 31 6.6
UniRef50_Q92616 Cluster: GCN1-like protein 1; n=40; Deuterostomi... 31 6.6
UniRef50_UPI000051AD14 Cluster: PREDICTED: similar to CG7134-PA ... 31 8.7
UniRef50_Q749V8 Cluster: Putative uncharacterized protein; n=4; ... 31 8.7
UniRef50_Q6AP16 Cluster: Probable oligopeptide ABC transporter, ... 31 8.7
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 31 8.7
UniRef50_Q9ZCR9 Cluster: 30S ribosomal protein S8; n=9; Ricketts... 31 8.7
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 190 bits (463), Expect = 9e-48
Identities = 87/100 (87%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W
Sbjct: 31 SKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQ 90
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
NLLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 91 NNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 173 bits (420), Expect = 1e-42
Identities = 79/100 (79%), Positives = 89/100 (89%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 181
SKVI+KFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT
Sbjct: 31 SKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWT 90
Query: 182 -NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LLPSRQFG++VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct: 91 ARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 172 bits (418), Expect = 3e-42
Identities = 80/100 (80%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SKVIV FLTVMMKHGY GEFEI+DDHR GKIVVNLTGRLNKCGVIS RFDV + D+++W
Sbjct: 154 SKVIVWFLTVMMKHGYTGEFEIIDDHRDGKIVVNLTGRLNKCGVISLRFDVQLKDLDKWQ 213
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
NLLP RQFG++VLTT GI+DHEEARRKH GGKILGFFF
Sbjct: 214 NNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 171 bits (415), Expect = 6e-42
Identities = 77/99 (77%), Positives = 88/99 (88%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SK IV+FLTVMMKHGYI EFEI+DDHRAGK+VVNLTGRLNKCGVISPRFDV + D+E+W
Sbjct: 129 SKAIVRFLTVMMKHGYISEFEIIDDHRAGKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQ 188
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 295
NLLP+RQFG++VLTT GIMD EE R+KH GG+ILGFF
Sbjct: 189 NNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 161 bits (392), Expect = 4e-39
Identities = 76/100 (76%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
S+VI++FLTVM KHGYIGEFEI DDHRAGK+VV LT RLNKCGVISPRF V + D+E+W
Sbjct: 31 SEVIIRFLTVM-KHGYIGEFEITDDHRAGKMVVYLTDRLNKCGVISPRFHVQLKDLEKWQ 89
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
NLLPS QFG+++LTTS GI D EEARRKH GGKILGFFF
Sbjct: 90 NNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 157 bits (380), Expect = 1e-37
Identities = 72/94 (76%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W
Sbjct: 197 SKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWR 256
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 280
NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 257 NNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 109 bits (261), Expect = 3e-23
Identities = 48/100 (48%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 181
S V+ FL +M + GYI F++ D HR G+I V+L GR+N C ++ R DV +IE++T
Sbjct: 30 STVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYT 89
Query: 182 -NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LP+RQ+GY+V+TT GI+DHEEA ++++GG++LGFF+
Sbjct: 90 ERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 108 bits (259), Expect = 5e-23
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SK+I + L VM K+GYIGEFE +DD RAG V L GR+NK G I PRF V +++ E+W
Sbjct: 31 SKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWE 90
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LP+ +FG L+++TS G+M H+EA K +GG+++ + +
Sbjct: 91 KRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 107 bits (256), Expect = 1e-22
Identities = 47/94 (50%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +2
Query: 20 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPS 196
FL M++HGYI F + D R+GK +++L GRLN+CG ISP + V + IE + T LLP+
Sbjct: 35 FLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPA 94
Query: 197 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
RQFG+++ TS GI+DH+E +++GGKILG+F+
Sbjct: 95 RQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 105 bits (251), Expect = 4e-22
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 181
SK+I+ L VM K GYIGEFE +DD RAGKI+V L GR+NKCG ISPR+ + N + R
Sbjct: 31 SKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLP 90
Query: 182 N----LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
+ LPS++ G ++++T G+M H + R+ +GG LG+ +
Sbjct: 91 DYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 103 bits (248), Expect = 1e-21
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SK I L VM GYIG+FE +DD +AG V L GR+NKCG I PR+ V ERW
Sbjct: 31 SKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWE 90
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LP++ FG L+LTTS G+M EAR K +GG++L + +
Sbjct: 91 KQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 95.5 bits (227), Expect = 4e-19
Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
S +I L V+ GY+ FE VDD +AGK V L G +N+CG + PR+ ++ E+W
Sbjct: 48 SNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWE 107
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LP+R +G L++TTS G+M H EAR + +GG+++ + +
Sbjct: 108 KRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 95.1 bits (226), Expect = 5e-19
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SK+I L VM +GYI FE V++HR GK +V L+G +N CG I PRF + + E +
Sbjct: 30 SKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYE 89
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LP+R FG L+++T+ G+M ++AR++ LGG +L + +
Sbjct: 90 KRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 93.9 bits (223), Expect = 1e-18
Identities = 43/100 (43%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
S +I + L VM + YI FE++++ R GK V L+ +N CGVI PR V ++IER+
Sbjct: 30 SVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYE 89
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
+ LP++ FG ++LTT+ GIM H EAR+ +GGK+L + +
Sbjct: 90 SRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 91.9 bits (218), Expect = 4e-18
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
SK+ V+ L + K GYIGEFE V+D R GK V+L ++ KCG ISPRF V + W
Sbjct: 31 SKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWE 90
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LPS G LV+TT+ G+M H EA + +GG ++G+ +
Sbjct: 91 QQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 73.3 bits (172), Expect = 2e-12
Identities = 32/100 (32%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW- 178
S +I+K + +M + GYI + +VD R I + L+ N+ I PRF V +++E++
Sbjct: 30 SNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYE 89
Query: 179 TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
LP+ FG L+L+TS G++ + EA+ + +GG ++ + +
Sbjct: 90 KRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 2e-10
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 44 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 136
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 26.2 bits (55), Expect(2) = 2e-10
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 2 SKVIVKFLTVMMKH 43
SKV++KFL VM KH
Sbjct: 63 SKVVIKFLQVMQKH 76
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 4e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 20 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 175
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 68 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 169
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
pneumoniae
Length = 142
Score = 41.1 bits (92), Expect = 0.008
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS----PRFDVPINDI 169
SK+ + L +++K GY+ F+++++ K +V + + + S + P I
Sbjct: 38 SKLKIAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLRI 97
Query: 170 ERWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 292
R LP G +++TS G+M + AR K +GG+IL +
Sbjct: 98 YRPFEKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAY 140
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 39.9 bits (89), Expect = 0.019
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV--VNLTGRLNKCGVISPRFDVPINDIER 175
SK+ + L+V+ K GYI F I D ++ +N + VIS ++
Sbjct: 27 SKLCINVLSVLYKLGYIRGFIIKDQKNITILLKYINNKPAVRNIAVISTPGRRTYLKHKK 86
Query: 176 WTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
L + G+L+L+TS GI+ EE+ +GG+ L
Sbjct: 87 LEKFLTKKDSGFLILSTSKGILTDEESNMFKIGGEAL 123
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.025
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 50 IGEFEIVDDHRAGKIVVNLTGRLNK 124
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 39.1 bits (87), Expect = 0.033
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG--VISP--RFDVPINDI 169
+K++V L V + G+I ++++D + GK +N+ + ++ G VIS R +
Sbjct: 29 AKIVVSILEVFLAKGFIESYKVID--KDGKQSINVVLKYDEKGRSVISEIKRISKSGRRV 86
Query: 170 ERWTNLLPSRQFGY--LVLTTSGGIMDHEEARRKHLGGKIL 286
+ + L + GY +V++TS G++ +EEA + ++GG+ L
Sbjct: 87 YKGRDELKRFKNGYGTIVVSTSKGVIGNEEAYKANVGGEAL 127
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 37.5 bits (83), Expect = 0.10
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGV-ISPRFDVPINDIER 175
SK+ ++++ GYI F +DD + G + V L ++ + + R P
Sbjct: 31 SKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYLKYDEYDQPAIRMLERVSRPGRREYA 90
Query: 176 WTNLLP--SRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
++ LP G ++L+TS G+M +EARR +GG++L F
Sbjct: 91 DSDNLPEVKNGLGIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 37.5 bits (83), Expect = 0.10
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 29 VMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGVISPRFDVPINDIERWTNL--LPS- 196
++ + GYI ++ V+D G I V L +NK I V + ++T +P
Sbjct: 37 ILFEKGYILNYKFVEDGPQGTIKVALKYDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRV 96
Query: 197 -RQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
G +++TS G+M ++EA +GG++L + +
Sbjct: 97 INGLGIAIISTSKGVMTNKEAAELKIGGEVLCYVY 131
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.18
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 143 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.31
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 77 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 229
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 35.1 bits (77), Expect = 0.54
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS--PRFDVPINDIER 175
SK+ + ++ + G+I + E ++D++ G + + L N VI+ R P +
Sbjct: 30 SKIKKEIAELLKREGFIRDVEYIEDNKQGILRIFLKYGANNERVITGLKRISKPGLRVYA 89
Query: 176 WTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 292
+ +P G +++TS G+M ++AR+ GG+++ +
Sbjct: 90 KADEVPRVLNGLGIALVSTSKGVMTDKDARQLQTGGEVVAY 130
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 0.94
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 206 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 1.2
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 206 GYLVLTTSGGIMDHEEARRKHLGGKIL 286
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q3S2A0 Cluster: Ribosomal protein S8; n=1; Thalassiosira
pseudonana|Rep: Ribosomal protein S8 - Thalassiosira
pseudonana (Marine diatom)
Length = 128
Score = 33.5 bits (73), Expect = 1.6
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVD-DHRAGKIVV---NLTGRLNKCGVIS-PRFDVPIND 166
+K+I+ FL ++ G+I ++I D KI + N +N IS P + +
Sbjct: 28 TKLIIAFLDILWDEGFILGYKIYSADSNILKIFLKYKNGNPVINSVKPISKPSQQIYYSV 87
Query: 167 IERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
+ W L S++ ++LTTS G+M E +R +GGK L
Sbjct: 88 SQLWK--LDSKK-NLIILTTSKGLMTVNECKRAQIGGKPL 124
>UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Rep:
Ribosomal protein S8 - Halimeda opuntia
Length = 133
Score = 33.5 bits (73), Expect = 1.6
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Frame = +2
Query: 23 LTVMMKHGYIGEFEIVDDHR-----AGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNL 187
L +++ HG+I F +++ K V+ RL++ G R V ++ + +
Sbjct: 38 LNILVHHGFIKNFSQINNREFLVTLKSKSVLRKLKRLSRPGC---RLYVSAQNLPQ---I 91
Query: 188 LPSRQFGY-----LVLTTSGGIMDHEEARRKHLGGKILGF 292
L S Q G + L+TS GI+ EAR +GG+ILG+
Sbjct: 92 LRSGQLGLAPRAIIFLSTSKGILSDREARHLKVGGEILGY 131
>UniRef50_Q7QWF3 Cluster: GLP_336_20608_17336; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_20608_17336 - Giardia lamblia
ATCC 50803
Length = 1090
Score = 33.5 bits (73), Expect = 1.6
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -1
Query: 117 SLPVRLTTILPALWSSTISNSPI*PCFIITVKNLTITFE 1
+LP RL +I P LW+S IS + PC ++T+ L+ ++
Sbjct: 171 TLPTRLQSICPLLWTSYISLDSL-PCRVLTITLLSSAYD 208
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.1 bits (72), Expect = 2.2
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 107 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE G +L
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLL 182
Query: 287 GFF 295
G+F
Sbjct: 183 GYF 185
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 33.1 bits (72), Expect = 2.2
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEF-EIVDDHRAGKIVVNLTGRLNKCGVISP--RFDVPINDIE 172
SKV++ L ++++ GYI F E V K++ N I R P +
Sbjct: 30 SKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVFLKYFNSAAAIRKIVRVSRPGKRVY 89
Query: 173 RWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
+ +P G +++TS GIM AR +GG+IL
Sbjct: 90 SSADKMPRFYNALGIYIVSTSKGIMLDSHARNAGVGGEIL 129
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 2.9
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 206 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_O21254 Cluster: Ribosomal protein S8; n=1; Reclinomonas
americana|Rep: Ribosomal protein S8 - Reclinomonas
americana
Length = 128
Score = 32.3 bits (70), Expect = 3.8
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 181
SK+ L V+ + GYI +FE + + I+ N I V I
Sbjct: 30 SKLNFDILNVLYEEGYIRDFEKKTNKKNQDIINVRLKYYNNTSAIKNIQRVINQHIS--L 87
Query: 182 NLLPSRQFGYL--VLTTSGGIMDHEEARRKHLGGKIL 286
LL G + +L+TS GI +EA+R +LGG +L
Sbjct: 88 KLLNQIDLGLVTYILSTSKGIFSGKEAKRLNLGGTVL 124
>UniRef50_Q8F5E7 Cluster: Virulence factor mviN; n=4;
Leptospira|Rep: Virulence factor mviN - Leptospira
interrogans
Length = 531
Score = 31.9 bits (69), Expect = 5.0
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 128 GVISPRFDVPINDIERWTNLLPSRQFG--YLVLTTSGGIMDHEEARRKHLGGKILGFFF* 301
G+++ F V + NLL +L L G + EEA K + G +L F F
Sbjct: 36 GMVASAFSVAYRLPNMFRNLLAEGTLSQSFLPLYAESGKISEEEA--KIMSGAVLSFLFF 93
Query: 302 VYSIQVKIHFLF 337
+ SI V I FLF
Sbjct: 94 ILSILVGIVFLF 105
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 5.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 206 GYLVLTTSGGIMDHEEARRKHLGGKIL 286
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 31.9 bits (69), Expect = 5.0
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG--VIS--PRFDVPINDI 169
SKV +++ G+I F++ D + G + V L + ++ G I+ R P +
Sbjct: 27 SKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRVYL--KYDEAGGHAINNIDRVSRPGRRV 84
Query: 170 ERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKIL 286
++ +P+ + G +++TS GIM ++A + LGG++L
Sbjct: 85 YVKSDKIPTVRSGMGMSIISTSKGIMSGKQATEQKLGGELL 125
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 5.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 197 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 292
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
>UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocystis
pacifica SIR-1|Rep: Rieske (2Fe-2S) region -
Plesiocystis pacifica SIR-1
Length = 578
Score = 31.5 bits (68), Expect = 6.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 80 RAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 181
R G I + G+ N+ G ++P FD+P + E WT
Sbjct: 125 RNGLIYIYYAGKGNEHGEVTPAFDIPELETEGWT 158
>UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165;
Bacteria|Rep: 30S ribosomal protein S8 - Gloeobacter
violaceus
Length = 133
Score = 31.5 bits (68), Expect = 6.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 206 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 298
G +++TS G+M +ARR +GG++L + F
Sbjct: 103 GIAIISTSQGVMTDRDARRAGVGGEVLCYVF 133
>UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8;
Chlorobiaceae|Rep: 30S ribosomal protein S8 - Chlorobium
tepidum
Length = 131
Score = 31.5 bits (68), Expect = 6.6
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 206 GYLVLTTSGGIMDHEEARRKHLGGKIL 286
G +L+TS GI+ +EAR +++GG++L
Sbjct: 101 GLFILSTSKGILTDKEAREQNVGGEVL 127
>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
mallei (Pseudomonas mallei)
Length = 131
Score = 31.5 bits (68), Expect = 6.6
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS-PRFDVPINDIERW 178
SKV V V+ GYI +F + D ++ + L + + R P + R
Sbjct: 30 SKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALKYYAGRPVIERLERVSKPGLRVYRG 89
Query: 179 TNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
N +P G +++T G+M +AR +GG+++
Sbjct: 90 RNEIPQVMNGLGVAIVSTPKGVMTDRKARATGVGGEVI 127
>UniRef50_Q92616 Cluster: GCN1-like protein 1; n=40;
Deuterostomia|Rep: GCN1-like protein 1 - Homo sapiens
(Human)
Length = 2671
Score = 31.5 bits (68), Expect = 6.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 180 VHLSMSLIGTSKRGEMTPHLFSLPVR-LTTILPALWSSTISNSP 52
+H + LIG +GE P F LP + +T+ILP L ++ SP
Sbjct: 2235 LHKEIRLIGNESKGEHVPG-FCLPKKGVTSILPVLREGVLTGSP 2277
>UniRef50_UPI000051AD14 Cluster: PREDICTED: similar to CG7134-PA
isoform 1, partial; n=1; Apis mellifera|Rep: PREDICTED:
similar to CG7134-PA isoform 1, partial - Apis mellifera
Length = 574
Score = 31.1 bits (67), Expect = 8.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 103 IDNDLASSVVINDFKFSNIAMLHHYC*KLDNNFR 2
ID++L +DF N+AML+HYC K++ +
Sbjct: 41 IDDELVYENFYDDFGPLNLAMLYHYCQKVNKKLK 74
>UniRef50_Q749V8 Cluster: Putative uncharacterized protein; n=4;
Geobacter|Rep: Putative uncharacterized protein -
Geobacter sulfurreducens
Length = 111
Score = 31.1 bits (67), Expect = 8.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 38 KHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPR-FDVPINDIERWTNLLPSRQFGY 211
K+G++ + +V HR + + L GR K G PR D P D W + PS F Y
Sbjct: 23 KNGFLVDVRMVKRHRQYEAALFLNGRY-KPGPPLPRPLDNPSGDTTHWMGVRPSVGFTY 80
>UniRef50_Q6AP16 Cluster: Probable oligopeptide ABC transporter,
permease protein; n=1; Desulfotalea psychrophila|Rep:
Probable oligopeptide ABC transporter, permease protein
- Desulfotalea psychrophila
Length = 317
Score = 31.1 bits (67), Expect = 8.7
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = -1
Query: 189 SKFVHLSMSLIGTSKRGEMTPHLFSLPVRLTTILPALWSSTI 64
S V + + ++ T G++ +L +LPV ++ +PA W++ +
Sbjct: 109 SVMVGIPLGILSTRHHGKLADNLLALPVLISISVPAFWTAIL 150
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 31.1 bits (67), Expect = 8.7
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPR-FDVP--INDIE 172
S++I K+L ++ K G I F D +VNL NK + P I I
Sbjct: 28 SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLRHFQNKVVTQDIQLISTPSKIKKIS 87
Query: 173 RWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
R + + L+L+T GIM H + R GG I+
Sbjct: 88 RKELISLHLKNKMLILSTPKGIMSHINSIRHKAGGFII 125
>UniRef50_Q9ZCR9 Cluster: 30S ribosomal protein S8; n=9;
Rickettsia|Rep: 30S ribosomal protein S8 - Rickettsia
prowazekii
Length = 132
Score = 31.1 bits (67), Expect = 8.7
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Frame = +2
Query: 2 SKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL----TGRLNKCGV--ISP---RFDV 154
SK+ L V+ K GYI ++ + V L G + C + +S R
Sbjct: 30 SKIKTSILDVLQKEGYIKDYVTTQKNNISYTEVALKYSVNGEASICEIHRVSKPGKRVYS 89
Query: 155 PINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 286
I D++ + N G +L+T G+M EA K++GG+++
Sbjct: 90 AIKDLKGYYN-----NMGIYILSTPYGVMSDREAHIKNVGGEVI 128
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,242,588
Number of Sequences: 1657284
Number of extensions: 8458968
Number of successful extensions: 18536
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 18178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18509
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -