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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F18
         (442 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_59538| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05)                 28   3.9  
SB_16013| Best HMM Match : DUF1248 (HMM E-Value=8.2)                   27   6.9  
SB_25720| Best HMM Match : Enterotoxin_HS (HMM E-Value=1.9)            24   7.6  
SB_55964| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  

>SB_59538| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05)
          Length = 191

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 176 KKYCAPCPYWNRVLIITNYYIVET*NIIY 262
           KK  A C  ++ +L I N+Y++ET  ++Y
Sbjct: 19  KKMAAFCWIFSLLLTIPNFYLIETRKVLY 47


>SB_16013| Best HMM Match : DUF1248 (HMM E-Value=8.2)
          Length = 176

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 112 YPEIWVNFLKCIYKMKTIRTLEEI 183
           YP  +VNF+ C  K KT+   E++
Sbjct: 81  YPRGFVNFMTCNQKRKTVTVTEKV 104


>SB_25720| Best HMM Match : Enterotoxin_HS (HMM E-Value=1.9)
          Length = 706

 Score = 24.2 bits (50), Expect(2) = 7.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 167 GLWKKYCAPCPYWNR 211
           G  KK C  CP WNR
Sbjct: 319 GHCKKACIGCPDWNR 333



 Score = 21.0 bits (42), Expect(2) = 7.6
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +2

Query: 185 CAPCPYWNRVLIIT 226
           C  CP WN+    T
Sbjct: 343 CVECPSWNKCCYTT 356


>SB_55964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 125

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 175 EEILRTLSILESCVNNY 225
           E++LRTL ILE+  N+Y
Sbjct: 28  EQVLRTLEILENAANDY 44


>SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 416

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 182 ISSKVLMVFILYIHFKKL-THISGYSKSHIYLFHMLNYLQ*IHYT 51
           ++  +L++ +LY+ +KKL  H  G + +H  +FH  + L  I YT
Sbjct: 286 LTISILILLLLYVTYKKLRNHRRGPNYNHA-VFHKNSSLVNISYT 329


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,126,111
Number of Sequences: 59808
Number of extensions: 228436
Number of successful extensions: 410
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 859323430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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