BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_F18 (442 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_59538| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05) 28 3.9 SB_16013| Best HMM Match : DUF1248 (HMM E-Value=8.2) 27 6.9 SB_25720| Best HMM Match : Enterotoxin_HS (HMM E-Value=1.9) 24 7.6 SB_55964| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1 SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1 >SB_59538| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05) Length = 191 Score = 27.9 bits (59), Expect = 3.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 176 KKYCAPCPYWNRVLIITNYYIVET*NIIY 262 KK A C ++ +L I N+Y++ET ++Y Sbjct: 19 KKMAAFCWIFSLLLTIPNFYLIETRKVLY 47 >SB_16013| Best HMM Match : DUF1248 (HMM E-Value=8.2) Length = 176 Score = 27.1 bits (57), Expect = 6.9 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 112 YPEIWVNFLKCIYKMKTIRTLEEI 183 YP +VNF+ C K KT+ E++ Sbjct: 81 YPRGFVNFMTCNQKRKTVTVTEKV 104 >SB_25720| Best HMM Match : Enterotoxin_HS (HMM E-Value=1.9) Length = 706 Score = 24.2 bits (50), Expect(2) = 7.6 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = +2 Query: 167 GLWKKYCAPCPYWNR 211 G KK C CP WNR Sbjct: 319 GHCKKACIGCPDWNR 333 Score = 21.0 bits (42), Expect(2) = 7.6 Identities = 6/14 (42%), Positives = 7/14 (50%) Frame = +2 Query: 185 CAPCPYWNRVLIIT 226 C CP WN+ T Sbjct: 343 CVECPSWNKCCYTT 356 >SB_55964| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 125 Score = 26.6 bits (56), Expect = 9.1 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +1 Query: 175 EEILRTLSILESCVNNY 225 E++LRTL ILE+ N+Y Sbjct: 28 EQVLRTLEILENAANDY 44 >SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 416 Score = 26.6 bits (56), Expect = 9.1 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -3 Query: 182 ISSKVLMVFILYIHFKKL-THISGYSKSHIYLFHMLNYLQ*IHYT 51 ++ +L++ +LY+ +KKL H G + +H +FH + L I YT Sbjct: 286 LTISILILLLLYVTYKKLRNHRRGPNYNHA-VFHKNSSLVNISYT 329 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,126,111 Number of Sequences: 59808 Number of extensions: 228436 Number of successful extensions: 410 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 366 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 410 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 859323430 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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