Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F18
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70212-5|CAA94165.3|  320|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AL137227-7|CAB70235.1|  787|Caenorhabditis elegans Hypothetical ...    28   2.6  
AC026301-1|AAK68897.1|  280|Caenorhabditis elegans Hypothetical ...    28   3.5  
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    27   8.0  

>Z70212-5|CAA94165.3|  320|Caenorhabditis elegans Hypothetical
           protein R04D3.7 protein.
          Length = 320

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 161 VFILYIHFKKLTHISGYSKSHIYLFHMLNYLQ*IHYTFYKFFIFVI 24
           +F+  + F+   HI  Y    IY+   ++++    YTF +FFIFV+
Sbjct: 229 IFLQGLTFQIFGHILVYVP--IYICTFISFITKTEYTFSQFFIFVL 272


>AL137227-7|CAB70235.1|  787|Caenorhabditis elegans Hypothetical
           protein F58D5.6 protein.
          Length = 787

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 12/40 (30%), Positives = 26/40 (65%)
 Frame = +1

Query: 106 FEYPEIWVNFLKCIYKMKTIRTLEEILRTLSILESCVNNY 225
           +E  +++ +  KC+ K+K ++T  +  + LSI++S VN +
Sbjct: 312 YEPEKLFTSLPKCVEKLKALKTQPDFDK-LSIIDSVVNTF 350


>AC026301-1|AAK68897.1|  280|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.6 protein.
          Length = 280

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 97  ICDFEYPEIWVNFLKCIYKMKTIRTLEEI 183
           +C +E+ +I+VNFL  I+    I  L  +
Sbjct: 247 VCSYEFMKIFVNFLSAIFSENVILILNNL 275


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -3

Query: 170 VLMVFILYIHFKKLTHISGYSKSHIYLFHMLNYLQ*IHYTFYKFFIFVILNCF 12
           +L+ +I   HF+  T    Y K+++YL   L  +  I ++F+ F++ +    F
Sbjct: 2   LLIHYINLTHFQNHTEYFPYLKNYLYLEFFLYIIDTIQFSFF-FWVMLCAKQF 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,529,874
Number of Sequences: 27780
Number of extensions: 192698
Number of successful extensions: 398
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)