Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F16
(529 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0321 + 33112793-33113026,33113166-33113546 118 2e-27
01_06_0463 + 29567339-29567644,29568416-29568835 99 1e-21
05_06_0235 - 26609049-26609468,26610068-26610343,26611579-266117... 100 1e-21
04_04_0490 + 25603540-25603591,25603612-25604105,25604184-25604870 31 0.57
10_08_0748 - 20277623-20277736,20277956-20279425 31 0.76
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 29 3.1
01_06_1023 + 33890733-33891034,33891171-33891258,33894253-338945... 28 4.0
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 27 7.1
05_07_0174 + 28156399-28156525,28157094-28157155,28157428-28158615 27 7.1
04_04_1024 - 30206429-30206702,30207977-30208062 27 7.1
03_06_0646 + 35260497-35262371,35262500-35262683,35262906-352630... 27 7.1
03_01_0118 - 929956-929988,930059-930145,930230-930331,930515-93... 27 7.1
01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605 27 7.1
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 27 9.3
11_04_0372 + 16915047-16915406,16915493-16916341 27 9.3
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 27 9.3
09_04_0619 - 19001350-19001359,19001737-19001800,19001955-190020... 27 9.3
07_03_0878 - 22251023-22251166,22251279-22251329,22251425-222515... 27 9.3
03_02_0293 - 7166470-7167618 27 9.3
>03_06_0321 + 33112793-33113026,33113166-33113546
Length = 204
Score = 118 bits (285), Expect = 2e-27
Identities = 54/125 (43%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Frame = +1
Query: 169 IDHVRCRYPYCIVWTPIPVLTWIFPFLGHMGICTSSGIIRDFAGPYFVSEDLMAFGNPTK 348
ID R R+P CIVWTP+P+++W+ PF+GH+GIC G+I DFAGP FVS D AFG +
Sbjct: 11 IDPRRARFPCCIVWTPLPLISWLIPFIGHIGICREDGVILDFAGPNFVSVDNFAFGAVAR 70
Query: 349 YWQLS-----PLNAGQGQAGWDAAVAEASEIYKKRMHIIFYDNCHSHVATALNIMNYDGC 513
Y Q++ L +G + WD A+ + + ++ R + +F NCHS V LN + Y G
Sbjct: 71 YIQVNSDECYKLLEPEGASTWDDALRKGVQEFQHRGYSLFTCNCHSFVVNNLNRLFYSGH 130
Query: 514 KNWNM 528
WN+
Sbjct: 131 DKWNV 135
>01_06_0463 + 29567339-29567644,29568416-29568835
Length = 241
Score = 99 bits (238), Expect = 1e-21
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 19/150 (12%)
Frame = +1
Query: 136 NSPEEAVLMDLIDHVRCRYPYCIVWTPIPVLTWIFPFLGHMGICTSSGIIRDFAGPYFVS 315
NS +E + ID R R+P CIVWTP+P+++W+ P++GH GIC G + DFAG VS
Sbjct: 24 NSLQELWPVGEIDPKRARFPCCIVWTPLPIVSWLAPYIGHAGICREDGTVLDFAGSNLVS 83
Query: 316 EDLMAFGNPTKYWQLS------PLNAG---------QGQAG----WDAAVAEASEIYKKR 438
D A+G+ +Y QL P+N +AG WD A+ + +
Sbjct: 84 MDNFAYGSIARYLQLDRKKCCFPVNLATHVCERSYKHAEAGTAISWDDALQLGMRSFGHK 143
Query: 439 MHIIFYDNCHSHVATALNIMNYDGCKNWNM 528
+ +F NC+S VA LN + Y+G WN+
Sbjct: 144 FYNLFTCNCYSFVANCLNRLAYNGSVKWNV 173
>05_06_0235 -
26609049-26609468,26610068-26610343,26611579-26611746,
26611850-26611945
Length = 319
Score = 99.5 bits (237), Expect = 1e-21
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Frame = +1
Query: 88 VESMTGDQSPGTPLDVNSPEEAVLMDLIDHVRCRYPYCIVWTPIPVLTWIFPFLGHMGIC 267
VE+ GD G N +E + +D R+P CIVWTP+PV++W+ P++GH+GI
Sbjct: 89 VEAACGD---GVVSSSNEMQELWPLGEVDQKGTRFPCCIVWTPLPVVSWLAPYIGHVGIA 145
Query: 268 TSSGIIRDFAGPYFVSEDLMAFGNPTKYWQLS------PLNAG---------QGQAG--- 393
G + DFAG FVS D +A+G+ +Y QL P N +AG
Sbjct: 146 REDGTVMDFAGSNFVSVDDLAYGSAARYLQLDRRKCCFPANLAAHVCARSYEHSEAGTAI 205
Query: 394 -WDAAVAEASEIYKKRMHIIFYDNCHSHVATALNIMNYDGCKNWNM 528
WD A+ + ++ + + +F N HS VA+ LN + Y G WN+
Sbjct: 206 SWDDALQSGARRFEHKCYNLFTCNSHSFVASCLNRLAYGGSVGWNV 251
>04_04_0490 + 25603540-25603591,25603612-25604105,25604184-25604870
Length = 410
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +1
Query: 82 LIVESMTGDQSPGTPLDVNSPEEAVLMDLIDHVRCRYPYCIVWTPIPVLTWIFPFLGHMG 261
+++++ D P + L E+ V+ +L+ V R + P W+ P++ H+G
Sbjct: 178 MLIDNTWKDTLPPSALAFIILEKVVMPELVADVVDRASQRLGEPVDPASVWVSPWIPHLG 237
Query: 262 ICTSSGIIRDFAG 300
+ G+ D AG
Sbjct: 238 VDRLHGVYLDIAG 250
>10_08_0748 - 20277623-20277736,20277956-20279425
Length = 527
Score = 30.7 bits (66), Expect = 0.76
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = -3
Query: 449 IICILFLYISEASATAASHPACP*PALRGDSCQYLVGFPNAMRSSETKYGPAKSLIIPDD 270
++ +LFLY+ A+AT +P C P +++V PNA SS P+ S P
Sbjct: 37 VMPVLFLYMLVAAATPFYNPRCS-PESNAAMARFVVAMPNA--SSVNGSSPSSSSPPPTP 93
Query: 269 VQMPI*PKN----GKIHVKTGIGVQT 204
V+ P+ + G H+ GIG +
Sbjct: 94 VR-PMRSADEAPTGLRHIAFGIGASS 118
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 QSPGTPLDVNSPEEAVLMDLIDHVRCRYPYCIVWTPIPVLTWIFPF--LGHMGICTS 273
++ G P VN P ++ CR P+C V + +L W++ F L H+ IC S
Sbjct: 449 ETQGFPNAVNQPNFPSVVVQPGENSCR-PFCFVLSTSLMLQWLYSFQILLHVTICYS 504
>01_06_1023 +
33890733-33891034,33891171-33891258,33894253-33894522,
33894616-33894724,33894833-33894950,33895051-33895183,
33895306-33895493,33895566-33895752,33895797-33895841,
33895850-33895917,33896093-33896186,33896284-33896475,
33896656-33896736,33897363-33897425
Length = 645
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 319 PPKQSMGQQNL*LFQMMYRCPYDPKMERSMSKPGSVSKRCSKGNDISRGR*DPL 158
PP G+ + +F M + P DP +E + +PGS S + ++ G+ D +
Sbjct: 310 PPAAGSGELSFVIFGDMGKAPLDPSVEHYI-QPGSTSVAKAVAAEMQTGKVDSI 362
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 294 KISDYSR*CTDAHMTQKWKDPCQNRDRCPNDAVRVTTSHVVDEI 163
K + YSR C DAH ++K +N + P ++R+ + VV+E+
Sbjct: 146 KDNGYSRICKDAHTSRK-----RNGEFSPTFSMRLRSRKVVEEV 184
>05_07_0174 + 28156399-28156525,28157094-28157155,28157428-28158615
Length = 458
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 205 VWTPIPVLTWIFPFLGHMGICTSSGIIRDFAG 300
VWTP+P L F+GH C+ S + +F G
Sbjct: 349 VWTPVPTLVGRMLFVGHG--CSRSYELANFPG 378
>04_04_1024 - 30206429-30206702,30207977-30208062
Length = 119
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 301 PYFVSEDLM-AFGNPTKYWQLSPLNAGQGQAGWDAAVAEA 417
P V +D++ + G+P KYW P G A DA A A
Sbjct: 47 PAVVPDDVIGSVGSPDKYWGPHPTTGVFGPAAVDAKAAAA 86
>03_06_0646 + 35260497-35262371,35262500-35262683,35262906-35263007,
35263101-35263231,35263315-35263584,35263765-35263943,
35264229-35264275,35264452-35264541,35264596-35264645,
35264673-35264725,35264886-35265009,35265094-35265369,
35265460-35265593,35265672-35265758,35265864-35265977,
35266180-35266309
Length = 1281
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 261 HLYIIWNNQRFCWPI-LCFGGPHGIWKS 341
H+Y N +R+C+ I FG P+ +WK+
Sbjct: 1226 HIYTYINGERYCYRISWYFGIPNWMWKT 1253
>03_01_0118 -
929956-929988,930059-930145,930230-930331,930515-930610,
931053-931148,931502-931564,931565-931630,931716-931790,
931906-932077,932116-932285
Length = 319
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 217 IPVLTWIFPFLGHMGICTSSGIIRDFAGPYFVSEDLMAFGNPTKYW 354
IPVL + LG + ++G++ DF+ P V +++ P W
Sbjct: 124 IPVLNDLTMVLGSIAQSRATGVVVDFSEPSTVYDNVKQVSYPPTIW 169
>01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605
Length = 821
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 85 IVESMTGDQSPGTPLDVNSPEEAVLMDLIDHVRCRYPYCIVWTPIPVLTWIF 240
IV S +G S G P A + +LI+HV P P+P+ T+IF
Sbjct: 741 IVVSDSGWPSAGAPAATKDNARAYVQNLINHVSKGTPK----RPVPIETYIF 788
>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 320 SSETKYGPAKSLIIPDDVQMPI*PKNGKIH 231
S T+ P KSL +P+D+ P P+ IH
Sbjct: 2312 SVHTESCPGKSLPVPEDISAPKSPEERAIH 2341
>11_04_0372 + 16915047-16915406,16915493-16916341
Length = 402
Score = 27.1 bits (57), Expect = 9.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 273 IWNNQRFCWPILC 311
+WN +R CW +LC
Sbjct: 302 VWNERRDCWDLLC 314
>11_04_0364 -
16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 27.1 bits (57), Expect = 9.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 273 IWNNQRFCWPILC 311
+WN +R CW +LC
Sbjct: 254 VWNERRDCWDLLC 266
>09_04_0619 -
19001350-19001359,19001737-19001800,19001955-19002099,
19002434-19002917,19003175-19003260,19003417-19003484,
19003565-19003709,19004561-19004677
Length = 372
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 334 GNPTKYWQLSPLNAGQGQAGWDAAVAEASEI 426
GN K+ +P+ AGQ + G +A E++EI
Sbjct: 22 GNMIKHDHFTPVGAGQEELGLEATGIESNEI 52
>07_03_0878 -
22251023-22251166,22251279-22251329,22251425-22251500,
22251847-22252229,22252983-22253042,22253133-22253368,
22253457-22253559,22254692-22254824,22254930-22255039
Length = 431
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 337 NPTKYWQLSPLNAGQGQAGWDAAV 408
NP YW L P++ +G G D A+
Sbjct: 189 NPASYWVLDPIDGTKGFLGGDDAL 212
>03_02_0293 - 7166470-7167618
Length = 382
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 270 CTDAHMTQKWKDPCQNRDRCPNDAVRVTTSHVVDEIH 160
C +T KW DP +RD +RVT + + H
Sbjct: 316 CIVESVTPKWMDPVWDRDEIDEYVLRVTRFRLKHDRH 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,433,049
Number of Sequences: 37544
Number of extensions: 341653
Number of successful extensions: 702
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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