Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F16
         (529 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006661-1|AAF39886.2|  168|Caenorhabditis elegans Hypothetical ...   167   3e-42
AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical ...    29   1.6  
AL032646-1|CAA21676.1|  385|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical ...    27   6.3  
U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine rece...    27   8.3  
AF067942-10|AAG45578.2|  358|Caenorhabditis elegans Hypothetical...    27   8.3  

>AC006661-1|AAF39886.2|  168|Caenorhabditis elegans Hypothetical
           protein H20J04.6 protein.
          Length = 168

 Score =  167 bits (407), Expect = 3e-42
 Identities = 77/128 (60%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
 Frame = +1

Query: 157 LMDLIDHVRC----RYPYCIVWTPIPVLTWIFPFLGHMGICTSSGIIRDFAGPYFVSEDL 324
           +M L D   C    RYPYCIVWTPIP LTW FPF+GHMGI  S GIIRDFAG Y+V+ED 
Sbjct: 1   MMPLTDRDICPENNRYPYCIVWTPIPCLTWFFPFIGHMGIANSRGIIRDFAGSYYVAEDD 60

Query: 325 MAFGNPTKYWQLSPLNAGQGQAGWDAAVAEASEIYKKRMHIIFYDNCHSHVATALNIMNY 504
           M FG PT+YWQL P     G   +D AV +AS+ YK R H +  DNCHSHVA ALN M Y
Sbjct: 61  MGFGWPTRYWQLGPEKVEGGAEVFDRAVQDASDTYKTRTHNLICDNCHSHVALALNKMRY 120

Query: 505 DGCKNWNM 528
           D  ++WNM
Sbjct: 121 DEREDWNM 128


>AF067942-9|AAG45572.1|  347|Caenorhabditis elegans Hypothetical
           protein ZK6.2 protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 323 SWHLEIQLNIGSCHLLMLVKDKLDG 397
           S+H+ +QLN     L+ LVKD +DG
Sbjct: 317 SYHVLVQLNQSKVELMQLVKDGIDG 341


>AL032646-1|CAA21676.1|  385|Caenorhabditis elegans Hypothetical
           protein Y54E2A.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 342 WISKCHEVLRNKVWASKISDYSR*CTDAHMT 250
           W+  C EV+R+K     + +Y R  TD   T
Sbjct: 338 WLDMCREVIRDKTLHKTLKEYQRAMTDGVRT 368


>AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical
           protein Y71F9AR.3 protein.
          Length = 746

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +1

Query: 358 LSPLNAGQGQAGWDAAVAEASEIYKKRMHII---FYDNCHSHVATALNIMNYDGCKNW 522
           L  L+AG     +D   + +   Y K +       Y   HSH  +A++++ Y G +N+
Sbjct: 46  LPDLSAGHSMDRYDPTASPSFSTYAKCLGFSPDGKYMAFHSHARSAISVLRYSGLENF 103


>U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine
           receptor, class t protein20 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -3

Query: 521 QFLHPS*FIIFNAVATWE*QLS*NIICILFLYISEASATAASHPACP*PALRG 363
           QF+    F+I  +   W  Q+S   +CI++L +++   T+     CP   L G
Sbjct: 272 QFIAAPPFLILVSQIAW--QISSGSVCIVYLTLNKTIRTSVMKMVCPKSYLYG 322


>AF067942-10|AAG45578.2|  358|Caenorhabditis elegans Hypothetical
           protein ZK6.1 protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 323 SWHLEIQLNIGSCHLLMLVKDKLDGMLQWQKLQRY 427
           S+H+ +QLN      + LVKD ++G+ +   + +Y
Sbjct: 264 SYHVLVQLNQSKVETMQLVKDGIEGVYKMITVVQY 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,392,858
Number of Sequences: 27780
Number of extensions: 298741
Number of successful extensions: 736
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)