Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F14
(452 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_2285| Best HMM Match : IncA (HMM E-Value=3.2) 31 0.45
SB_4793| Best HMM Match : DUF1279 (HMM E-Value=0.31) 31 0.59
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 31 0.59
SB_51799| Best HMM Match : SET (HMM E-Value=0) 29 1.4
SB_23351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_56769| Best HMM Match : UIM (HMM E-Value=0.0025) 28 4.2
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 27 5.5
SB_59750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_34308| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 27 7.3
SB_775| Best HMM Match : bZIP_2 (HMM E-Value=3) 27 7.3
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_28525| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_5508| Best HMM Match : bZIP_2 (HMM E-Value=3) 27 7.3
SB_18508| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_56860| Best HMM Match : Cadherin (HMM E-Value=4.4e-16) 27 9.6
SB_35537| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_30273| Best HMM Match : SIS (HMM E-Value=1.2e-25) 27 9.6
SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_5649| Best HMM Match : DUF1212 (HMM E-Value=2.6) 27 9.6
SB_5605| Best HMM Match : Peptidase_C2 (HMM E-Value=2e-13) 27 9.6
SB_1332| Best HMM Match : FeoB_N (HMM E-Value=0.94) 27 9.6
>SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 31.9 bits (69), Expect = 0.26
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 174 NKADLSKALAKRETHATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQ 353
++ + K THA S S+ A E T+LG ++LR +LD+
Sbjct: 36 DEESIPKTSTSLRTHAAHSMASQTAGTASAVTSFITEGAATSLGLQFLREEYPNLDENLI 95
Query: 354 NLISKQRG 377
S QRG
Sbjct: 96 RFQSDQRG 103
>SB_2285| Best HMM Match : IncA (HMM E-Value=3.2)
Length = 293
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 213 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
THA T S+ + E T LG ++LR +LD+ S QRG
Sbjct: 49 THAAHKTASQTTGTASAETSFITEGAATRLGLQFLREEYPNLDENLIQFQSDQRG 103
>SB_4793| Best HMM Match : DUF1279 (HMM E-Value=0.31)
Length = 396
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 213 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
THA T S+ A T + E T LG ++LR +L++ S +RG
Sbjct: 49 THAAHRTASQTAGTTSAETSFITEGAATRLGLQFLREEYPNLNENLIRFQSDRRG 103
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 30.7 bits (66), Expect = 0.59
Identities = 24/93 (25%), Positives = 38/93 (40%)
Frame = +3
Query: 39 REFGVKSIINERQDIIVRDKYKVSGTAAKLGHLTGYHHCTLLVNANKADLSKALAKRETH 218
R +K +D V D+ G ++GH+ +C L AN LS A+ +
Sbjct: 406 RRLSLKQARQVLRDFGVSDEELKCGACGQIGHMRTNKNCPLYQEANPGSLSVAMTDEQ-- 463
Query: 219 ATASTRSEVANLTDLDNRVTVESLQTALGYEYL 317
E N+ + D+ V VE + LG +L
Sbjct: 464 ----VAEEEFNMPN-DDLVKVEGTKITLGKAFL 491
>SB_51799| Best HMM Match : SET (HMM E-Value=0)
Length = 503
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 113 PRDFIFISDNDILTFIDYGFDTKF 42
P DF++IS N + +F+D+ FD +
Sbjct: 239 PTDFVYISQNKVPSFLDHLFDHNY 262
>SB_23351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 213 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGFQFV 389
THA S + A + V E +T LG + LR LD+ S +RG + +
Sbjct: 49 THAAHSMALQTAGTASAETSVITEGAETRLGLQSLREEYPDLDENLIRFQSDRRGKKLI 107
>SB_56769| Best HMM Match : UIM (HMM E-Value=0.0025)
Length = 358
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 234 RSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGF 380
+ + L + +ESL + YLRTP H+ L +K+R F
Sbjct: 58 KKTIFELIQTEVEEAIESLSQMVARPYLRTPRSHIIQATSLLANKRRTF 106
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 27.9 bits (59), Expect = 4.2
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +3
Query: 63 INERQDIIVRDKYKVSGTAAKLGHLTGYHHCTLLVNANK------ADLSKALAKRETHAT 224
+N+RQDII++ K SGT + + C +N K AD++ + KR T T
Sbjct: 161 LNQRQDIIIKPADKGSGTVV-MDKDWYINECNRQLNDTKFYTQLDADITNDIQKRVT--T 217
Query: 225 ASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLI 362
R + + D + + + G Y+ P +H+ G +I
Sbjct: 218 YINRMHTDGIINQDTKSYLTPKDSKPGRFYI-LPKIHIRGPGGTII 262
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 330 VPECGGTRSLAQFVGFPQSLD 268
+P GGT+ L + VG P SLD
Sbjct: 48 LPGAGGTQRLPRLVGLPDSLD 68
>SB_59750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +3
Query: 213 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
THA T S+ + E +T LG ++LR +L + S +RG
Sbjct: 49 THAAHRTASQTTGTASAETSFITEGAETRLGLQFLREKYPNLRESLLQFQSDRRG 103
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 357 GFVLRHLDGVPECGGTRSLAQFVGFPQSLDY--PSRSDSPPRTASMPSRESH 208
GF+L+ L G P G + GFP + + P D P MP + +
Sbjct: 245 GFILKGLQGPPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGY 296
>SB_34308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 210 ETHATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGFQFV 389
E H T+ R L R ++S+QT +E + +HL+ +RG+++V
Sbjct: 263 EHHVTSDCRCIKQKLPKHTQRAPMQSIQTMAQFELVSLNVVHLE-------CSRRGYEYV 315
Query: 390 NPTDDWFPGLA 422
D+F A
Sbjct: 316 LVVVDYFTRFA 326
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -1
Query: 200 KCLAEI--CLIGVD*KCAMV-ITCQMAQLCSCPRDFIFISDN 84
+C +I C V C M+ + + + C+CP FI SDN
Sbjct: 614 RCFDDINECATPVTNDCEMICVNVRSSYKCACPTGFILNSDN 655
>SB_775| Best HMM Match : bZIP_2 (HMM E-Value=3)
Length = 322
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 216 HATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
HA T S+ A T + E LG ++LR +L++ S +RG
Sbjct: 50 HAAHRTASQTAGTTSAETSFITEGAAARLGLQFLREEYPNLNENLLRFQSDRRG 103
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 342 HLDGVPECGGTRSLAQFVGFPQSLDYPSRSDSPPRTASMPSRESHVLQVPC*DLP 178
H+DG + S G+ Q+ D PS D +T +PS Q P D+P
Sbjct: 1561 HMDGYTQTPDVPS--HMDGYTQTPDIPSHMDDHTQTPDIPSHMDDHTQTP--DIP 1611
>SB_28525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 342 HLDGVPECGGTRSLAQFVGFPQSLDYPSRSDSPPRTASMPSRESHVLQVPC*DLP 178
H+DG + S G+ Q+ D PS D +T +PS Q P D+P
Sbjct: 233 HMDGYTQTPDVPS--HMDGYTQTPDIPSHMDDHTQTPDIPSHMDDHTQTP--DIP 283
>SB_5508| Best HMM Match : bZIP_2 (HMM E-Value=3)
Length = 322
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 216 HATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
HA T S+ A T + E LG ++LR +L++ S +RG
Sbjct: 50 HAAHRTASQTAGTTSAETSFITEGAAARLGLQFLREEYPNLNENLLRFQSDRRG 103
>SB_18508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 246 ANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQR 374
ANL+ N + + S+ A R ALHL G Q +++K R
Sbjct: 105 ANLSSFGNVMVLASVMMAAMISVDRYLALHLQMGYQTVVTKSR 147
>SB_56860| Best HMM Match : Cadherin (HMM E-Value=4.4e-16)
Length = 748
Score = 26.6 bits (56), Expect = 9.6
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 36 FREFGVKSIINERQDIIVRDKYKVSGTAAKLGHLTGYHHCTLLVNA-NKADLSKALAKRE 212
F+ G K ++ + D + +K+ + GH G T +VN NK + K +
Sbjct: 381 FKLIGSKVVVAKSLDHESKSIHKIVIKCSDFGHPVGITTATFMVNVLNKDEPPKQITLNP 440
Query: 213 THAT--ASTRSEVANLTDLD 266
T A + A LT LD
Sbjct: 441 TSVAEDAGIGARAAGLTALD 460
>SB_35537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 293 NCARLRVPPHSGTPSR*RRTKPDLKTTWI 379
NC LR+PP G R P L+ WI
Sbjct: 60 NCGTLRLPPLRGCRLIYGRHSPHLRVVWI 88
>SB_30273| Best HMM Match : SIS (HMM E-Value=1.2e-25)
Length = 303
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 284 FHSHSIIQVGQIRHLGP-RRCRRVSLTFC 201
F ++ ++ G H+G RRCRR+ L C
Sbjct: 87 FETNQVVLGGMKAHIGTIRRCRRIMLIAC 115
>SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +3
Query: 213 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
THA S S A + E T LG + LR LD+ S +RG
Sbjct: 49 THAAHSMASRTAGTASAETSFITEGAATRLGLQSLREEYPDLDENLIRFQSDRRG 103
>SB_5649| Best HMM Match : DUF1212 (HMM E-Value=2.6)
Length = 293
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 213 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
THA T S+ + E T LG ++LR +L + S +RG
Sbjct: 49 THAAHRTASQTTGTASAETSFITEGAATRLGLQFLREEYPNLKESLLRFQSDRRG 103
>SB_5605| Best HMM Match : Peptidase_C2 (HMM E-Value=2e-13)
Length = 598
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 385 NWNPRCFEIRFCPPSSRWSA 326
NWNPR FE +F S+ W+A
Sbjct: 468 NWNPRLFEYKFTYHST-WAA 486
>SB_1332| Best HMM Match : FeoB_N (HMM E-Value=0.94)
Length = 348
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +3
Query: 216 HATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 377
HA S S A + E T LG ++LR +L++ S +RG
Sbjct: 50 HAAHSMASRTAGTASAETSFNTEGAATRLGLQFLREEYPNLNENMLRFQSDRRG 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,550,972
Number of Sequences: 59808
Number of extensions: 267641
Number of successful extensions: 680
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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