Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F12
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    24   0.90 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   2.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.6  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   4.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.4  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 232 EVFLLHPIHPYQSYPVSMPAL-YSYPQLLGTEMFHPHYYNLHN 107
           EV  L+P  P+ +  +    + YS  +L    M H H Y++H+
Sbjct: 53  EVLRLYPSVPFIARSLGEDIVTYSGHKLKAGSMVHLHIYDMHH 95


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
 Frame = -3

Query: 433 PPVQSVAP--YTRHPSSNPPASRLSLYQSTVESPT 335
           P V  V P  Y  H  + PP S    Y     SPT
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSPNQQYTKDCSSPT 51


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 216 IQFILINHIQFQCQLSILI 160
           +QF  + H+  QC +++ I
Sbjct: 38  LQFFAVEHLLIQCYIAVSI 56


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +2

Query: 212 WMQQEYLSQPVQFSLWTLTRSFDCHSCIRLLQEEISMR*FVCWTLYS*LIKG 367
           WM  E    P + S W   ++    S + + +E + ++  +  TL   L+ G
Sbjct: 379 WMSGESFKSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISLVIG 430


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +2

Query: 212 WMQQEYLSQPVQFSLWTLTRSFDCHSCIRLLQEEISMR*FVCWTLYS*LIKG 367
           WM  E    P + S W   ++    S + + +E + ++  +  TL   L+ G
Sbjct: 379 WMSGESFKSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISLVIG 430


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 383 TGVATFPLSVNCRESNTRTISSKFLPVVAGYKS 285
           T  + F   +NC  ++   + S  LP+ + Y+S
Sbjct: 14  TNGSNFSKFINCHYTSGHLLGSSSLPLRSFYRS 46


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +1

Query: 73  ESHIEWCNDIKSYAGCSN 126
           E+H  W N + +   C N
Sbjct: 314 ENHASWVNHLSNIEDCLN 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,884
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)