Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F12
(507 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.03c |tpx1||thioredoxin peroxidase Tpx1|Schizosaccharomyc... 51 9e-08
SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway prote... 31 0.075
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 31 0.13
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 27 1.2
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 2.1
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 2.1
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 2.1
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 2.8
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 2.8
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 26 3.7
SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|ch... 26 3.7
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 26 3.7
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 25 4.9
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 4.9
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 25 6.5
SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|ch... 25 6.5
SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces p... 25 8.6
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 25 8.6
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 25 8.6
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 25 8.6
>SPCC576.03c |tpx1||thioredoxin peroxidase Tpx1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 192
Score = 51.2 bits (117), Expect = 9e-08
Identities = 32/127 (25%), Positives = 60/127 (47%)
Frame = +1
Query: 25 FTKRNTKVIGLSCDSIESHIEWCNDIKSYAGCSNEDETFPYPIIEDKNRELALKLDMIDK 204
F +RN +VI S DS SH+ + N + G + P++ D + +++ ++ +
Sbjct: 62 FAERNAQVILTSTDSEYSHLAFINTPRKEGGLGGIN----IPLLADPSHKVSRDYGVLIE 117
Query: 205 DELDATGIPLTARAVFIVDPNKKFRLSLLYPATTGRNFDEIVRVLDSLQLTDKGKVATPV 384
D G+ R +F++DP R + GR+ DE +R+LD+ Q ++ P
Sbjct: 118 D----AGVAF--RGLFLIDPKGVLRQITINDLPVGRSVDEALRLLDAFQFVEEHGEVCPA 171
Query: 385 DWKMGDE 405
+W G +
Sbjct: 172 NWHKGSD 178
>SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway protein
But1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 31.5 bits (68), Expect = 0.075
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 19 PDFTKRNTKVIGLSCDSIESHIEWCNDIKSYAGCSNEDETFPYPIIEDKNRELALKLDMI 198
P NT VIG++ D++E+ +W K++ + + F P+I D N E+ ++ M+
Sbjct: 135 PCLQSYNTDVIGITTDTVENICQW----KAHLPRALQ---FSLPVISDSNNEICREMGML 187
Query: 199 DKDELDATGIPLTARAVFIVD 261
G L A+ I+D
Sbjct: 188 H----PLGGAKLALDAIVIID 204
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 30.7 bits (66), Expect = 0.13
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 205 DELDATGIPLTARAVFIVDPNKKFRLSLLYPATTGRNFDEIVRVLDSL 348
DE+ AT L AR + D N+K R +LL F E V+D L
Sbjct: 417 DEISATLRSLNARLKVVSDENEKMRNALLQMLPEEMAFQEFQNVMDDL 464
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/119 (14%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +1
Query: 97 DIKSYAGCSNEDETFPYPIIEDKNRELALKLDMIDKDELDATGIPLTARAVFIVDPNKKF 276
D + + ED+ +P+ + +RE+ + D + +D+ + + + ++P ++
Sbjct: 2294 DATFFVTITKEDKAWPFRLKNCTSREICYEQKRPDPESVDSRFLQGSRSMKYALNPGEEA 2353
Query: 277 RLSLLYPATTGRNFD-EIVRVLDSLQLTDKGKVATPVDWKMGDECMVLPTVPEDQVAEI 450
S +P + E+ + + L ++ G++ ++ + + P V D + +
Sbjct: 2354 NYSWDFPILKSKLLQVEVGKAIHDLDISSVGQLEPWHPTELDQKIRIHPEVKVDSLTSL 2412
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 439 LDPPVQSVAPYTRHPSSNPPASRLSLYQSTVESPTH 332
L+PP +S P + PS+NP + L+ S + +P +
Sbjct: 600 LEPPPESPGPSLQIPSNNPVYTNLTDTDSMMGAPDY 635
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 2.1
Identities = 18/93 (19%), Positives = 42/93 (45%)
Frame = +1
Query: 121 SNEDETFPYPIIEDKNRELALKLDMIDKDELDATGIPLTARAVFIVDPNKKFRLSLLYPA 300
SN D++ Y +N + D +D D +++ ++ + +K + P
Sbjct: 262 SNSDDSISYKRRRSRNAANRIT-DYVDSDLSESSMKEKQSKIEKYMKSDKSSKN--FKPP 318
Query: 301 TTGRNFDEIVRVLDSLQLTDKGKVATPVDWKMG 399
++++++V + ++Q D GK+ + WK G
Sbjct: 319 FQKKSWEDLVDCVKTVQQLDNGKLIAKIKWKNG 351
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 283 SLLYPATTGRNFDEIVRVLDSLQLTDKGKVATPVDWK 393
+LL P T GR+ DEI RV L GKV WK
Sbjct: 531 TLLLPETKGRDADEIDRV--ELFYGGDGKVECNSKWK 565
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 2.8
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 439 LDPPVQSV--APYTRHPSSNPPASRLSLYQSTVESPTHELSH 320
LD P ++ PY++ S++P A R S+Y + P + H
Sbjct: 244 LDLPYRTTDFIPYSKDLSTSPEAHRTSIYSYSANLPNYYNEH 285
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 2.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -3
Query: 199 QSYPVSMPALYSYPQLLGTEMF 134
++YP +P+ + +PQ L E+F
Sbjct: 179 KAYPHGLPSFHLFPQFLSAELF 200
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 25.8 bits (54), Expect = 3.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 283 SLLYPATTGRNFDEIVRVLDSLQLTDKGKVATPVDWK 393
+LL P T GR+ DEI R+ L GKV WK
Sbjct: 530 TLLLPETKGRDADEIDRL--ELFYGKDGKVQCDSKWK 564
>SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 3.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 200 IRMNWMQQEYLSQPVQFSLWTLTRSFDCHSCIRLLQE 310
IR++ + EYL Q F WT S + S I LLQ+
Sbjct: 371 IRLSDLYAEYLRQVATFDFWT---SKEYESLIALLQD 404
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 265 NKKFRLSLLYPATTGRNFDEIVRVLDSLQLT 357
NK FR+ L AT G + I V+DSL ++
Sbjct: 218 NKNFRI-LALSATPGNKLEAIQNVIDSLHIS 247
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 234 ERYSCCIQFILINHIQFQCQLSILILN 154
E Y CC F+L + CQL IL L+
Sbjct: 15 EFYDCCGLFLLTFFLLTTCQLRILSLS 41
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.4 bits (53), Expect = 4.9
Identities = 8/19 (42%), Positives = 17/19 (89%)
Frame = -1
Query: 342 VQHTNYLIEISSCSSRIQE 286
+QH + L+++S+C++RI+E
Sbjct: 708 IQHLDGLLKLSACNNRIKE 726
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 25.0 bits (52), Expect = 6.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 112 AGCSNEDETFPYPIIEDKNRELALKLDMIDKDELDATGIP 231
AG +D PY + + E L +DK+ TGIP
Sbjct: 71 AGTYRDDAGKPYVLPSVRQAETELLSQKLDKEYAPITGIP 110
>SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 121 SNEDETFPYPIIEDKNRELALKLDMIDKDELDATG 225
SN+ + YP ++++ L K+ DK LD G
Sbjct: 462 SNQGKEVRYPFLDERLMALFSKMKTTDKMRLDLVG 496
>SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 8.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 82 IEWCNDIKSYAGCSNEDETFPYPIIEDKNRELALK-LDMIDKD 207
I + +KS S FP+ I+ DK+ E LK LD +D++
Sbjct: 190 IRYLKHLKSVPNVSYYIYKFPFKILADKSLEDNLKYLDELDEN 232
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 24.6 bits (51), Expect = 8.6
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 85 EWCNDIKSYAGCSNEDETFPYPIIEDKNRELALKLDMIDKDEL 213
E+ DI Y E ET P P D+ +ELA K+ I D L
Sbjct: 202 EYVVDIFEYLN-ELEIETMPSPTYMDRQKELAWKMRGILTDWL 243
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 353 NCRESNTRTISSKFLPVVAGYKSDNRNFL-LGSTMKTARAVRGI 225
NC+++NT +IS+ F + YK +N L L S + + + G+
Sbjct: 214 NCKDNNTPSISNTF---IEPYKENNTEHLHLKSAFEPCQMMPGM 254
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 64 DSIESHIEWCNDIKSYAGCSNEDETF 141
+S +++ E C ++ YAGC + TF
Sbjct: 158 NSYDTNDETCKVLRKYAGCKIDISTF 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,250,961
Number of Sequences: 5004
Number of extensions: 47570
Number of successful extensions: 171
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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