Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F10
         (415 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.28 
SB_35638| Best HMM Match : Upf2 (HMM E-Value=2.1e-17)                  31   0.50 
SB_56457| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_11111| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_15918| Best HMM Match : Toxin_23 (HMM E-Value=2.3)                  28   2.6  
SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.6  
SB_22076| Best HMM Match : MIP (HMM E-Value=3.89981e-42)               27   6.1  
SB_17713| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.1  

>SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 706

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 282 YDTDLKLKSSKLHFDDXERYERMPFGQTGCDTFDQYEKNVID 407
           YD +   K  K+H+DD E Y  +       D +D Y+ N  D
Sbjct: 636 YDDNEGSKMVKVHWDDYENYVNVNVNDDDYDDYDDYDDNDYD 677


>SB_35638| Best HMM Match : Upf2 (HMM E-Value=2.1e-17)
          Length = 1420

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 144 QSNEQSYKDLVMPLITQLVDNLKSKQITD 230
           + N+Q Y+DL +P+ + L  N++ KQ+ +
Sbjct: 293 KGNKQQYRDLEIPISSDLAANMREKQVAE 321


>SB_56457| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 112

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 93  LKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHT 257
           ++V     D+V  FET  +NE   +  + P     V  L  K   D K    GHT
Sbjct: 1   MEVEKSPTDVVQEFETLAANEVKKERRIAPGEAHFVWKLIQKHGEDYKAERLGHT 55


>SB_11111| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1252

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 183 LITQLVDNLKSKQITDIKIYLAGHTSXYPYPILYDTDLKLKSSKLHFDD 329
           +++ LV +++ KQ+ D +   AG    Y Y +L  T L L + K+H +D
Sbjct: 221 ILSVLVKDVQEKQLFDKERMRAG----YEYEVLGGTHLMLATQKMHAED 265


>SB_15918| Best HMM Match : Toxin_23 (HMM E-Value=2.3)
          Length = 227

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 255 TSXYPYPILYDTDLKLKSSKLH 320
           T  YP+P LYDT L L++   H
Sbjct: 203 TEIYPHPSLYDTQLNLQTKISH 224


>SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 187

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 288 TDLKLKSSKLHFDDXERYERMPFGQTGCDTFDQYEKNVID 407
           +DLK +SS+L  D+  R  R   G+T    F++ E   +D
Sbjct: 124 SDLKTRSSRLRSDEKTRCSRRRTGRTIVLRFERVEAKYMD 163


>SB_22076| Best HMM Match : MIP (HMM E-Value=3.89981e-42)
          Length = 365

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 116 CLLVWHFELINVSDGVRLVRVGAAHASVRQHSRQQS 9
           CL VWHF  +N  D + +    A +    QHS + S
Sbjct: 173 CLRVWHFAPVN--DRMTICGAAAIYGMASQHSVEAS 206


>SB_17713| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 367

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 378 RYHIQFDQKAYARSALXRRN 319
           +Y  QF  +AYAR AL +RN
Sbjct: 241 KYQQQFTSRAYARIALAKRN 260


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,504,840
Number of Sequences: 59808
Number of extensions: 207991
Number of successful extensions: 514
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)