Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F10
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   0.59 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   0.78 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.0  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   1.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   1.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   1.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   2.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   2.4  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   3.2  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.2  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 0.59
 Identities = 21/84 (25%), Positives = 33/84 (39%)
 Frame = +3

Query: 3    LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQSNEQSYKDLVMP 182
            +T  L  +LP   V+     +        Q  V N+    ++  +T    +QS +  V+P
Sbjct: 959  VTTNLTTILPPVKVQSQQQSQQSQQQQQQQTIVTNQAGKSIL--QTANIKQQSPQQHVLP 1016

Query: 183  LITQLVDNLKSKQITDIKIYLAGH 254
              T L   +K      IK  L GH
Sbjct: 1017 GKTLLASQIKLVSPGQIKSLLTGH 1040



 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 165 KDLVMPLITQLVDNLKSKQITDI 233
           KD++  + TQ+  N  +K+ T+I
Sbjct: 873 KDVINDVKTQITTNTPAKKATNI 895


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 54  RCSARKRPAAQPAAV 10
           +CS RKRPA+Q  +V
Sbjct: 880 KCSDRKRPASQATSV 894


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 244 SRDTHLNIPTLSYTILI*N 300
           +R THLN    SYTI+I N
Sbjct: 473 ARFTHLNHADFSYTIVINN 491


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 110
           L  +LP  L   C +CTD  +   I  V +  V NK
Sbjct: 64  LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 110
           L  +LP  L   C +CTD  +   I  V +  V NK
Sbjct: 64  LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 3   LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 110
           L  +LP  L   C +CTD  +   I  V +  V NK
Sbjct: 64  LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +3

Query: 198 VDNLKSKQITDIKIYLAGHTSXYPYPILYDTDLKLKSSKLHFDDXERY 341
           +D L+     D +I +  + +   Y ILYD +   +  +  F + ER+
Sbjct: 361 LDLLREADFKDTEILIGNNENEGTYFILYDFNDIFEKDQASFLERERF 408


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +3

Query: 198 VDNLKSKQITDIKIYLAGHTSXYPYPILYDTDLKLKSSKLHFDDXERY 341
           +D L+     D +I +  + +   Y ILYD +   +  +  F + ER+
Sbjct: 361 LDLLREADFKDTEILIGNNENEGTYFILYDFNDIFEKDQASFLERERF 408


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 213 SKQITDIKIYLAGHTSXYPYPILYDTDLKL 302
           S + TD+++ +A     +P+  + D  L+L
Sbjct: 278 SSEATDLRMGVASFCKAFPWHFVVDRQLEL 307


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -2

Query: 345 ARSALXRRNVVWSSLVSNQYRIR*GRDIXMCV 250
           A+  +      W      QY+IR  +D+  C+
Sbjct: 596 AKKYVAGEQCCWHCFNCTQYQIRDHKDVTQCI 627


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
          protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 12 LLPAVLPDACVRCT 53
          LLP VL + C RCT
Sbjct: 56 LLPEVLNNHCNRCT 69


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 319 ISTTKSATSVCLLVKLDVIPSTNMKRTLST--LW 414
           +  T     VC+ +KL  +   N+K  + T  LW
Sbjct: 47  VVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLW 80


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 319 ISTTKSATSVCLLVKLDVIPSTNMKRTLST--LW 414
           +  T     VC+ +KL  +   N+K  + T  LW
Sbjct: 47  VVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLW 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,008
Number of Sequences: 438
Number of extensions: 1855
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)