Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F09
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    25   0.79 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    24   1.0  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   3.2  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   4.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   5.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   7.4  

>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = +3

Query: 87  IKLACQTHCRLIHIN*YFVLCME---FKTMQSRRKHEAYT-DQFVWITYYETCII*K 245
           + L C  +C L+H +   +LC +   F     +  +EA + +Q      +E C+  K
Sbjct: 6   VSLLCVIYCALVHADTVAILCSQKAGFDLSDLKSMYEANSEEQMKKFGCFEACVFQK 62


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +3

Query: 87  IKLACQTHCRLIHIN*YFVLCME---FKTMQSRRKHEAYT-DQFVWITYYETCII*K 245
           + L C  +C L+H +   +LC +   F     +  +E+ + +Q   +  +E C+  K
Sbjct: 6   VSLLCVIYCALVHADTVAILCSQKAGFDLSDLKSMYESNSEEQMKKLGCFEACVFQK 62


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 98  LSNSLQAYPYKLIFCALHGV*NNA 169
           +SN+ QA+ Y L    LH +  NA
Sbjct: 2   VSNTKQAFIYSLALLCLHAIFVNA 25


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 101 SNSLQAYPYKLIFCALHGV*NNA 169
           SN+ QA+ Y L    LH +  NA
Sbjct: 3   SNTKQAFIYSLALLCLHAIFVNA 25


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 185 MFAPRLHCFKLHAEHKI 135
           M +P+LH F L+  H++
Sbjct: 153 MCSPKLHVFDLNTSHQL 169


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 58  NYTYLDQPRI*NWLVKLTAGLSI*TNILCSAWSLKQCSL 174
           +Y +L + +   ++VKLT  LS   N L      ++C L
Sbjct: 141 HYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKL 179


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 203 LIGISFMFAPRLHCFKLHAEHKILVY 126
           ++G   +  P++H F LH    I +Y
Sbjct: 141 ILGEKQICRPKIHVFSLHDNKLITMY 166


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 37  VRNAFKINYTYLDQ 78
           V NA +IN+ YLD+
Sbjct: 125 VNNAARINWEYLDK 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,253
Number of Sequences: 438
Number of extensions: 3175
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)