Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F07
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   0.94 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   0.94 
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   6.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   6.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   8.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 201 DGNTF*KRLSVEIIINITLYLSGGNCIN 118
           D N +  RL+    +N+T Y  GG  +N
Sbjct: 124 DLNDYINRLNYSAFVNLTAYYDGGANLN 151


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 3   ARGINVPSHPRLLNSFCQSSVVHPLHMPEPTTFQ 104
           A G ++P H +L+ SF +   +     P PTT Q
Sbjct: 135 AGGNHLPFHEKLVESFPRGGSLPTPVTPTPTTVQ 168


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 557 ELSKGNRIKNGNSYKYRN 504
           E SK  +I + N+Y Y+N
Sbjct: 296 ERSKETKIISSNNYNYKN 313


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 557 ELSKGNRIKNGNSYKYRN 504
           E SK  +I + N+Y Y+N
Sbjct: 307 ERSKETKIISSNNYNYKN 324


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 391 TITNKKAFESSHYNEYLLKMFYLEV 317
           +++NK    +++YN Y  K  Y  +
Sbjct: 306 SLSNKTIHNNNNYNNYNNKKLYYNI 330


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 289 FRNNSYQMLVLLSKTFSISIHYSEM 363
           ++N+      L SKTF   + YSE+
Sbjct: 217 YQNSDDSFHRLTSKTFDNDLRYSEL 241


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,491
Number of Sequences: 438
Number of extensions: 2722
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)