Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F05
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 430 KIEILICINRVSGLGVTAASRLHRARDMRNY 338
           +I +   IN ++G+G T  +     RD +NY
Sbjct: 108 RIYVDTVINHMTGMGGTGTAGSQADRDGKNY 138


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 430 KIEILICINRVSGLGVTAASRLHRARDMRNY 338
           +I +   IN ++G+G T  +     RD +NY
Sbjct: 109 RIYVDTVINHMTGMGGTGTAGSQADRDGKNY 139


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 430 KIEILICINRVSGLGVTAASRLHRARDMRNY 338
           +I +   IN ++G+G T  +     RD +NY
Sbjct: 109 RIYVDTVINHMTGMGGTGTAGSQADRDGKNY 139


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 491 LKALTLPRDVCE*FNLFITVLLSTMV 568
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 491 LKALTLPRDVCE*FNLFITVLLSTMV 568
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 491 LKALTLPRDVCE*FNLFITVLLSTMV 568
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 491 LKALTLPRDVCE*FNLFITVLLSTMV 568
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 491 LKALTLPRDVCE*FNLFITVLLSTMV 568
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 430 YKEDHNFFSFFIESRIIM 483
           +K D+ +FSF+I S  ++
Sbjct: 51  HKSDYFYFSFYITSYTLL 68


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 430 YKEDHNFFSFFIESRIIM 483
           +K D+ +FSF+I S  ++
Sbjct: 51  HKSDYFYFSFYITSYTLL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,932
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)