Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F05
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.5  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   6.0  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   6.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.9  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 284 YSGVLCGVYSDCYRATPVP 228
           Y GV C VY DC      P
Sbjct: 470 YPGVFCRVYQDCLNTGTFP 488


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 228  CARIVTERRLIRFSSYRNPEHRRLELSVFRLVYCFVY 118
            C R    +R+ R S +   E +R E ++ RLV   VY
Sbjct: 1254 CHRFFDRKRIHRKSYFELRELKRAEKTIIRLVQNEVY 1290


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 489 KYHDYSGFDEKRKKIVI 439
           KYHD+SG+   R   +I
Sbjct: 107 KYHDHSGYGSSRNTFLI 123


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 78  RYWVYTGSSSPFTCTRSSKPT*THSTPVAGAPDSYT 185
           R+   T +S+P T ++ + PT T +TPV   P +++
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWS 165


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 78  RYWVYTGSSSPFTCTRSSKPT*THSTPVAGAPDSYT 185
           R+   T +S+P T ++ + PT T +TPV   P +++
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWS 165


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 316  ITIIHNMLLISTPESYAGYIVIATG 242
            I  IH  ++  T  S AG+IV+ TG
Sbjct: 2809 IGTIHQTVISFTGISRAGFIVLTTG 2833


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,501
Number of Sequences: 2352
Number of extensions: 12615
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)