Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_F05
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 66 1e-11
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 66 1e-11
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 66 1e-11
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 66 1e-11
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 66 1e-11
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 33 0.12
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 33 0.12
At4g12750.1 68417.m02002 expressed protein 28 4.4
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 28 4.4
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYLYT 124
+P L + I+ ++ A VLG+YGLI+A+ + T
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVIIST 77
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYLYT 124
+P L + I+ ++ A VLG+YGLI+A+ + T
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVIIST 77
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYLYT 124
+P L + I+ ++ A VLG+YGLI+A+ + T
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVIIST 77
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 118 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 159
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYLYT 124
+P L + I+ ++ A VLG+YGLI+A+ + T
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVIIST 79
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 158
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYLYT 124
+P L + I+ ++ A VLG+YGLI+A+ + T
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVIIST 78
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
G + + + PR+ ++ +IF E + +YG+IVAI L TK
Sbjct: 49 GSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTK 90
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + AQ LFV +++I IF LGL+G+IV I +
Sbjct: 133 GSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIM 171
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 127
G + + + PR+ ++ +IF E + +YG+IVAI L TK
Sbjct: 47 GSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTK 88
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + AQ LFV +++I IF LGL+G+IV I +
Sbjct: 131 GSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIM 169
>At4g12750.1 68417.m02002 expressed protein
Length = 1108
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 240 DACPCARIVTERRLIRFSSYRNPEHRR 160
D PC ++ ER + SS RNP H++
Sbjct: 172 DVSPCVDLLDERATLPQSSARNPPHQK 198
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 2 GDAGV-RGTAQQPRLFVGMILILIF 73
G GV +G A QPRL V ++L++IF
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIF 291
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,395,395
Number of Sequences: 28952
Number of extensions: 277252
Number of successful extensions: 567
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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