Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F03
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.050
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   0.82 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.9 bits (59), Expect = 0.050
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 188  GGSISWTVGLSHDGSACCG 132
            GG+++WT+ L    + CCG
Sbjct: 960  GGAVAWTIDLDDFSNRCCG 978


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.8 bits (49), Expect = 0.82
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 9/48 (18%)
 Frame = +1

Query: 124 LYC---PQQAEPSCDNPTVHEMDPPSGL------CDVPQCFCNVPNVR 240
           L+C   P   + S +N    E DP   L      C +P CFC+    R
Sbjct: 126 LFCNGKPDCKDESDENSCTVETDPNRALDCDPTQCVLPDCFCSADGTR 173


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +1

Query: 145 EPSCDNPTVHEMDPPS--GLCDVPQCFCN 225
           E +CD        PP    +C +P CFC+
Sbjct: 148 ENTCDIDNDPNRAPPCDPAVCVLPDCFCS 176


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 199 CDVPQCFCNVPNVR 240
           C +P CFC+    R
Sbjct: 167 CVLPDCFCSADGTR 180


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -2

Query: 374 ALIFERKILKN 342
           ++IFERK++KN
Sbjct: 114 SVIFERKVMKN 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,855
Number of Sequences: 336
Number of extensions: 2137
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)