Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_F01
         (160 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger ho...    27   4.7  

>M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger
           homeodomain protein 2 protein.
          Length = 3005

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 11  MTTNGSL-PDVSR*SLHLAVAAIAAHKS 91
           MTT G+  P VS  S H ++AA+AAH+S
Sbjct: 378 MTTGGAYTPQVS--SFHASLAALAAHES 403


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,146,257
Number of Sequences: 53049
Number of extensions: 127015
Number of successful extensions: 276
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 24,988,368
effective HSP length: 33
effective length of database: 23,237,751
effective search space used: 441517269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)