Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E20
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-24|CAB11568.2| 366|Caenorhabditis elegans Hypothetical p... 30 0.88
AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical ... 29 1.5
Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical p... 27 6.2
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 27 6.2
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 27 6.2
AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical ... 27 6.2
Z98866-13|CAB11552.1| 327|Caenorhabditis elegans Hypothetical p... 27 8.2
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 27 8.2
AC006617-2|AAF39765.2| 442|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z98866-24|CAB11568.2| 366|Caenorhabditis elegans Hypothetical
protein Y49E10.25 protein.
Length = 366
Score = 29.9 bits (64), Expect = 0.88
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 298 KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 426
KL+ GQP V +Y ++ W+ FP FR++ + DP+
Sbjct: 260 KLVTFGQPRVADYDHAAWH-------DATFPYSFRVINSRDPI 295
>AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical
protein K03H6.2 protein.
Length = 348
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 298 KLLLEGQPNVVEYAYSLWYRS 360
KLL GQP +YAYS W+++
Sbjct: 227 KLLTAGQPRTGDYAYSNWHQN 247
>Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.18 protein.
Length = 335
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 298 KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 426
KL+ GQP +Y Y++W+ FP FR++ + D V
Sbjct: 227 KLVTMGQPRTGDYDYAVWHDK-------TFPYSFRIVHHRDIV 262
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +1
Query: 175 NADPVMQLYNSVIVSDY-------KAAVKTTFQLEKECRSDVISSVVNKLLLEGQPNVVE 333
N+DP +L + SD +++ K +LEK+ +++S ++ K + E +PN +E
Sbjct: 123 NSDPRFKLDDKFAESDSDEDGNMEQSSEKQEMKLEKDKNRELLSKILGKSVEEKKPNTIE 182
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 27.1 bits (57), Expect = 6.2
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +1
Query: 175 NADPVMQLYNSVIVSDYKAAVKTTFQLEKECRS----DVISSVVNKLLLEGQ--PNVVEY 336
+A PV Q + ++ + K + + +E + D SV NK+ E PN+ EY
Sbjct: 605 SAAPVSQFFENITSKEDKETSQPSETVETAPANGNDYDEEKSVENKVSTETDAVPNLGEY 664
Query: 337 AYSLWYRSGEDIVKVYFPIEFRLLFNEDP 423
G + +V PI+ + NE+P
Sbjct: 665 GSKFAKVQGAETKQVSEPIQIETIENENP 693
>AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical
protein Y111B2A.3 protein.
Length = 718
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 202 NSVIVSDYKAAVKTTFQLEKECRSDVISSVVNKLLLEGQPNVVEYAYSLWYRSGE 366
++ ++ + K +K Q K+ D S + +L P VE+A S W++S E
Sbjct: 333 SNTVIENCKMILKAIGQSMKQPFDDEAKSYLTSEVLRKFPWPVEFACSTWFKSLE 387
>Z98866-13|CAB11552.1| 327|Caenorhabditis elegans Hypothetical
protein Y49E10.16 protein.
Length = 327
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 298 KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNED 420
KL+ GQP +YA++ W+ FP FR++ + D
Sbjct: 221 KLVTLGQPRTGDYAFATWH-------DATFPYSFRIVHHRD 254
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 34 PSRRRIDDDKMILITVVLSALVTRVSLTPLC-NNTAVSITSNDSPPFNNADPVMQLYN 204
P + KM ++ L T ++ + +NT V I SND+ + D V +LYN
Sbjct: 52 PRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYN 109
>AC006617-2|AAF39765.2| 442|Caenorhabditis elegans Hypothetical
protein C39B5.5 protein.
Length = 442
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 298 KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 426
KL+ GQP +Y Y+ W+ FP FR++ ++D V
Sbjct: 338 KLVTMGQPRTGDYDYATWHDK-------TFPYSFRIVHHKDIV 373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,603,128
Number of Sequences: 27780
Number of extensions: 153874
Number of successful extensions: 397
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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