SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E18
         (218 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2882|AAZ66475.1| 3100|Drosophila melanogaster CG7100-PK...    26   8.2  
AE014134-2880|AAZ66473.1| 3099|Drosophila melanogaster CG7100-PJ...    26   8.2  
AE014134-2878|AAN10997.1| 3096|Drosophila melanogaster CG7100-PG...    26   8.2  
AE014134-2876|AAN10995.1| 3095|Drosophila melanogaster CG7100-PC...    26   8.2  
AE014134-2874|AAN10994.1| 3096|Drosophila melanogaster CG7100-PF...    26   8.2  
AE014134-2872|AAN10992.1| 3095|Drosophila melanogaster CG7100-PH...    26   8.2  

>AE014134-2882|AAZ66475.1| 3100|Drosophila melanogaster CG7100-PK,
            isoform K protein.
          Length = 3100

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 180  HHSLAQVKCHCPCTTSVVHLQLPVI 106
            HH   + +CHCP   + +H +L ++
Sbjct: 2885 HHPPKKYECHCPMGFTGMHCELELL 2909


>AE014134-2880|AAZ66473.1| 3099|Drosophila melanogaster CG7100-PJ,
            isoform J protein.
          Length = 3099

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 180  HHSLAQVKCHCPCTTSVVHLQLPVI 106
            HH   + +CHCP   + +H +L ++
Sbjct: 2884 HHPPKKYECHCPMGFTGMHCELELL 2908


>AE014134-2878|AAN10997.1| 3096|Drosophila melanogaster CG7100-PG,
            isoform G protein.
          Length = 3096

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 180  HHSLAQVKCHCPCTTSVVHLQLPVI 106
            HH   + +CHCP   + +H +L ++
Sbjct: 2881 HHPPKKYECHCPMGFTGMHCELELL 2905


>AE014134-2876|AAN10995.1| 3095|Drosophila melanogaster CG7100-PC,
            isoform C protein.
          Length = 3095

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 180  HHSLAQVKCHCPCTTSVVHLQLPVI 106
            HH   + +CHCP   + +H +L ++
Sbjct: 2880 HHPPKKYECHCPMGFTGMHCELELL 2904


>AE014134-2874|AAN10994.1| 3096|Drosophila melanogaster CG7100-PF,
            isoform F protein.
          Length = 3096

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 180  HHSLAQVKCHCPCTTSVVHLQLPVI 106
            HH   + +CHCP   + +H +L ++
Sbjct: 2881 HHPPKKYECHCPMGFTGMHCELELL 2905


>AE014134-2872|AAN10992.1| 3095|Drosophila melanogaster CG7100-PH,
            isoform H protein.
          Length = 3095

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 180  HHSLAQVKCHCPCTTSVVHLQLPVI 106
            HH   + +CHCP   + +H +L ++
Sbjct: 2880 HHPPKKYECHCPMGFTGMHCELELL 2904


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,271,264
Number of Sequences: 53049
Number of extensions: 148262
Number of successful extensions: 294
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 24,988,368
effective HSP length: 52
effective length of database: 22,229,820
effective search space used: 444596400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -